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Evidence from the International Space Station suggests microbial populations are rapidly adapting to the spacecraft environment; however, the mechanism of this adaptation is not understood. Bacteriophages are prolific mediators of bacterial adaptation on Earth. Here we survey 245 genomes sequenced from bacterial strains isolated on the International Space Station for dormant (lysogenic) bacteriophages. Our analysis indicates phage-associated genes are significantly different between spaceflight strains and their terrestrial counterparts. In addition, we identify 283 complete prophages, those that could initiate bacterial lysis and infect additional hosts, of which 21% are novel. These prophage regions encode functions that correlate with increased persistence in extreme environments, such as spaceflight, to include antimicrobial resistance and virulence, DNA damage repair, and dormancy. Our results correlate microbial adaptation in spaceflight to bacteriophage-encoded functions that may impact human health in spaceflight.
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http://dx.doi.org/10.1038/s41467-023-42104-w | DOI Listing |
J Environ Manage
September 2025
School of Hydraulic and Environmental Engineering, Changsha University of Science and Technology, Changsha, 410114, China. Electronic address:
Microbial agents represent a valuable class of additives that can enhance the value and effectiveness of compost products. This paper provides a comprehensive review of the mechanisms and applications of microorganisms in regulating lignocellulose degradation, controlling gas emissions, and managing typical pollutants during the composting of organic solid wastes. Inoculation with microbial agents can significantly improve the degradation efficiency, quality, and environmental friendliness of compost.
View Article and Find Full Text PDFJ Environ Manage
September 2025
State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing, 100012, China.
The fragmented ecological environment in the mining ecosystem has a significant impact on the microbial community and affects ecosystem stability. Arbuscular mycorrhizal fungi (AMF) facilitate nutrient exchange and element cycling between soil and plants, which play a crucial role in the functionality and stability of soil ecosystems. However, the mechanism of ecological environment factors influencing AMF community assembly in mining areas is still unclear.
View Article and Find Full Text PDFPLoS One
September 2025
Department of Molecular Biology and Genetics, Faculty of Science and Letters, Istanbul Technical University, Istanbul, Türkiye.
Cytochrome P450 enzymes (P450s), particularly those of microbial origin, are highly versatile biocatalysts capable of catalyzing a broad range of regio- and stere-oselective reactions. P450s derived from extremophiles are of particular interest due to their potential tolerance to high temperature, salinity, and acidity. This study aimed to identify and classify novel microbial P450 enzymes from extreme environments across Türkiye, including hydrothermal springs, hypersaline lakes, and an acid-mine drainage site.
View Article and Find Full Text PDFInt J Syst Evol Microbiol
September 2025
State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.
The family , encompassing the genus and related taxa, comprises diverse Gram-negative, aerobic, rod-shaped bacteria found in varied habitats, including air, soil, water and glaciers. Recent genomic-based taxonomic revisions have reclassified some species into new genera, such as and , due to polyphyletic relationships within the family . Certain species are known for forming biofilms or functioning as aerobic anoxygenic phototrophic bacteria, traits that enhance resilience in extreme environments like the cryosphere.
View Article and Find Full Text PDFJ Microbiol Biol Educ
September 2025
University of California Riverside, Riverside, California, USA.
DNA literacy is becoming increasingly essential for navigating healthcare, understanding pandemics, and engaging with biotechnology-yet genomics education remains limited at the secondary level of education. We present a modular, hands-on curriculum designed for high school and early undergraduate students (ages 14-21) that introduces key genomics concepts through an experiment on fermentation, a process that is key to food preservation and medicine. Students follow a complete scientific process: exploring what DNA is and how microbial succession works, analyzing real DNA sequencing data, and writing a formal scientific report.
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