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The microbial community composition in aquatic ecosystems have received increased attention. However, the knowledge gap relative to the responses of bacterial, archaeal and fungal communities in co-contaminated river sediments remain poorly studied. Here, we investigated the changes of tetrabromobisphenol A (TBBPA) and copper (Cu) concentrations and the responses of microbial communities in co-contaminated sediments during long-term incubation. TBBPA concentrations significantly decreased over time, whereas Cu concentrations remained relatively stable over the 60-day incubation. Abundances of the bacterial 16S rRNA, archaeal 16S rRNA and fungal ITS genes ranged from 6.53 × 10 to 1.26 × 10 copies g, 1.12 × 10 to 5.47 × 10 copies g and 5.33 × 10 to 7.51 × 10 copies g in the samples, respectively. A total of 11, 6 and 5 bacterial, archaeal and fungal phyla were identified across all samples. Bacterial, archaeal and fungal communities mainly consisted of members from the phyla Proteobacteria and Acidobacteria, Methanomicrobia and Woesearchaeia as well as Agaricales and Helotiales, respectively. Fungal communities showed a stronger response to pollutant addition after a long incubation compared with bacterial and archaeal communities. The variance analysis results revealed that the bacterial, archaeal and fungal microbial communities of all treatments were distinctly distributed into two separated clusters according to incubation time. However, the three microbial communities did not significantly change in response to pollutant types, which was consistent with variation in relative abundances of the three microbial communities. These findings improve our understanding of the ecotoxicological effects of co-exposure on sediment microbial communities.
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http://dx.doi.org/10.1016/j.chemosphere.2021.129855 | DOI Listing |
Anaerobic methanotrophic archaea (ANME) are crucial to planetary carbon cycling. They oxidise methane in anoxic niches by transferring electrons to nitrate, metal oxides, or sulfate-reducing bacteria. No ANMEs have been isolated, hampering the biochemical investigation of anaerobic methane oxidation.
View Article and Find Full Text PDFPLoS One
September 2025
Bigelow Laboratory for Ocean Sciences, East Boothbay, Maine, United States of America.
Using environmental DNA (eDNA)-based tools, we examined sediments underlying a ~ 1.25 hectare commercial kelp farm in the Gulf of Maine growing sugar kelp (Saccharina latissima) for two farming seasons, post-harvest. Two eDNA methods were used: a newly designed S.
View Article and Find Full Text PDFJ Appl Microbiol
September 2025
Urban Horticulture Research and Extension Center, Shanghai Chenshan Botanical Garden, Shanghai 201602, China.
Aims: Phytoremediation is an effective method of remediating soils contaminated with heavy metals. However, it has some limitations in practical applications with regard to rare plant species, poor environmental adaptability, and long growth cycles. The dynamic response mechanisms of soil microbial communities during phytoremediation are still unclear, which restricts the optimization and promotion of this approach.
View Article and Find Full Text PDFJ Hazard Mater
August 2025
Hubei Key Laboratory of Microbial Transformation and Regulation of Biogenic Elements in the Middle Reaches of the Yangtze River, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan 430205, China; State Key Laboratory of Green and Efficient Development of
Microplastics (MPs) have been shown to enhance nitrous oxide (NO) emissions and soil salinization potentially amplifying this effect. This study investigated the individual and combined impacts of polyethylene (PE) MPs and salinity on NO emissions from paddy soils, while simultaneously analyzing related microbial parameters. MPs significantly increased cumulative NO emissions by 9.
View Article and Find Full Text PDFUnlabelled: Opsins are highly abundant retinal proteins in the membranes of photoheterotrophic bacteria. However, some microbial genomes encode an but lack the gene for the final enzyme in retinal synthesis. To account for this paradox, we hypothesized that bacterial opsins play a role in membrane structure and/or biogenesis independent from their potential for light-driven signaling or proton pumping.
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