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In vivo isotopic labeling empowers proteomic and metabolomic analyses to resolve relationships between the molecular composition, environment, and phenotype of an organism. Carbon-13 is particularly useful for plant labeling as it can be introduced via CO gas and readily assimilated into plant metabolic systems through natural carbon fixation. While short-term labeling experiments can be performed within a simple sealed enclosure, long-term growth in an isolated environment raises many challenges beyond nutrient availability and buildup of metabolic waste. Viable growth conditions must be maintained by means that do not compromise the integrity of the carbon-13 enrichment. To address these issues, an automated growth chamber equipped with countermeasures to neutralize stresses and ensure high isotopic enrichment throughout the life cycle of the plant has been developed. The following describes this growth chamber and its use in an example 130-day growth of ten soybean plants to full maturity, achieving 100% carbon-13 enrichment of new seed tissue. © 2018 by John Wiley & Sons, Inc.
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http://dx.doi.org/10.1002/cppb.20069 | DOI Listing |
J Lipid Res
September 2025
Department of Nutritional Sciences, Temerty Faculty of Medicine, University of Toronto, 1 King's College Circle, Toronto, Ontario, Canada, M5S 1A8. Electronic address:
Young females have higher circulating docosahexaenoic acid (DHA) levels than males, though the metabolic basis remains incompletely understood. Building on previous findings demonstrating higher hepatic synthesis of the DHA precursor, docosapentaenoic acid (DPAn-3) in males, this study extends the investigation to n-3 PUFA turnover in extrahepatic tissues of male and female C57BL/6N mice using compound-specific isotope analysis (CSIA). Animals were fed a 12-week diet enriched in either α-linolenic acid (ALA), eicosapentaenoic acid (EPA), or DHA, starting with a 4-week phase containing low carbon-13 (δC)-n-3 PUFA, followed by an 8-week phase with high δC-n-3 PUFA (n = 4 per diet, time point, sex).
View Article and Find Full Text PDFCancers (Basel)
July 2025
Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94563, USA.
Potent androgen receptor pathway inhibitors induce small cell neuroendocrine prostate cancer (SCNC), a highly aggressive subtype of metastatic androgen deprivation-resistant prostate cancer (ARPC) with limited treatment options and poor survival rates. Patients with metastases in the liver have a poor prognosis relative to those with bone metastases alone. The mechanisms that underlie the different behavior of ARPC in bone vs.
View Article and Find Full Text PDFMagn Reson Med
November 2025
Division of Medical Physics, Department of Radiology, Medical Center, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Purpose: Hyperpolarized (HP) carbon-13 (C) MRSI provides real-time information about metabolic processes but lacks high temporal and spatial resolution. This study introduces a multi-echo-balanced steady-state free precession (ME-bSSFP) method with a 3D radial readout trajectory in a spiral phyllotaxis pattern as a method for non-Cartesian HP C MRSI that allows for flexible reconstruction with high spatiotemporal resolution.
Methods: The approach uses ME-bSSFP with iterative decomposition of echo asymmetry and least-squares estimation (IDEAL) for separating C metabolite signals.
New Phytol
October 2025
Max-Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam, Germany.
Photoautotrophic organisms fix inorganic carbon (Ci) by RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE (RUBISCO) and PHOSPHOENOLPYRUVATE CARBOXYLASE (PEPC). Monitoring Ci assimilation rates in vivo is a major challenge in analyzing photoautotrophic metabolism and engineering improved photosynthesis, as conventional methods do not distinguish between these two fluxes. We explored widely applied gas chromatography mass spectrometry (GC-MS) metabolite profiling for C-positional fractional C enrichment (EC) analyses of aspartate to differentiate within one molecule between PEPC, RUBISCO, and CBB cycle activities by C pulse-labeling.
View Article and Find Full Text PDFSci Rep
July 2025
Saudi Aramco, Dhahran, 31311, Saudi Arabia.
Tracking gas migration geochemically is more challenging than tracking oil migration due to the deficiency in biomarkers and migration tracers, traditionally restricting gas tracking to isotope fingerprinting. This highlights the need for developing new fluid interpretation workflows that maximize the value of reservoir fluid data to constrain gas migration models. Systematic analysis of reservoir PVT fluid properties from 49 wells in a complex carbonate-evaporite sequence across four adjacent Paleozoic gas fields on the eastern part of the Arabian Plate, supported by multivariate statistical analysis, enabled the tracking of gas migration.
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