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We propose a method for fast, accurate and robust localization of several organs in medical images. We generalize the global-to-local cascade of regression random forest to multiple organs. A first regressor encodes the global relationships between organs, learning simultaneously all organs parameters. Then subsequent regressors refine the localization of each organ locally and independently for improved accuracy. By combining the regression vote distribution and the organ shape prior (through probabilistic atlas representation) we compute confidence maps that are organ-dedicated probability maps. They are used within the cascade itself, to better select the test voxels for the second set of regressors, and to provide richer information than the classical bounding boxes result thanks to the shape prior. We propose an extensive study of the different learning and testing parameters, showing both their robustness to reasonable perturbations and their influence on the final algorithm accuracy. Finally we demonstrate the robustness and accuracy of our approach by evaluating the localization of six abdominal organs (liver, two kidneys, spleen, gallbladder and stomach) on a large and diverse database of 130 CT volumes. Moreover, the comparison of our results with two existing methods shows significant improvements brought by our approach and our deep understanding and optimization of the parameters.
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http://dx.doi.org/10.1016/j.media.2015.04.007 | DOI Listing |
Newton
September 2025
Department of Mechanical Engineering, University of Wisconsin-Madison, Madison, Wisconsin, 53706, USA.
In confluent cell monolayers, patterns of cell forces and motion are systematically altered near topological defects in cell shape. In turn, defects have been proposed to alter cell density, extrusion, and invasion, but it remains unclear how the defects form and how they affect cell forces and motion. Here, we studied +1/2 defects, and, in contrast to prior studies, we observed the concurrent occurrence of both tail-to-head and head-to-tail defect motion in the same cell monolayer.
View Article and Find Full Text PDFMed Educ
September 2025
University of Miami Gordon Center for Simulation and Innovation in Medical Education, Miami, Florida, USA.
Introduction: Speaking up about medical errors is a critical behaviour for medical students, as it plays a vital role in enhancing patient safety. Few studies have explored the drivers and barriers affecting their willingness to speak up in clinical training, particularly within hierarchical Asian cultures. The purpose of this study was to explore drivers and barriers shaping medical students' speaking up behaviours about medical errors to inform education, mentorship and patient safety practices.
View Article and Find Full Text PDFJ Aging Stud
September 2025
University of Graz, Department of American Studies, Attemsgasse 25/II, 8010 Graz, Austria. Electronic address:
Tony Kushner's Angels in America, written in two parts during the early 1990s, vividly depicts the experiences of queer individuals confronting the AIDS crisis. Examined through the framework of anocriticism and queer temporality, the play challenges traditional life trajectories focused on reproduction, aging, and progress. Drawing on the work of theorists such as Roberta Maierhofer, Jack Halberstam, and Elizabeth Freeman, this analysis investigates how the play's fragmented narrative and interplay of supernatural and historical elements blur the boundaries between past, present, and future.
View Article and Find Full Text PDFGeobiology
September 2025
Dipartimento di Scienze, Università di Roma Tre, Roma, Italy.
Large-scale geological processes shape microbial habitats and drive the evolution of life on Earth. During the Oligocene, convergence between Africa and Europe led to the opening of the Western Mediterranean Basin, a deep-ocean system characterized by fluid venting, oxygen depletion, and the absence of benthic fauna. In this extreme, inhospitable seafloor environment, fusiform objects known as Tubotomaculum formed, whose origin has long remained controversial.
View Article and Find Full Text PDFNat Protoc
September 2025
Pharmacomicrobiomics Research Center and College of Pharmacy, Hanyang University, Ansan, Republic of Korea.
Metabolism is a fundamental process that shapes the pharmacological and toxicological profiles of drugs, making metabolite identification and analysis critical in drug development and biological research. Global Natural Products Social Networking (GNPS) is a community-driven infrastructure for mass spectrometry data analysis, storage and knowledge dissemination. GNPS2 is an improved version of the platform offering higher processing speeds, improved data analysis tools and a more intuitive user interface.
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