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The simultaneous replication of six coiled-coil peptide mutants by reversible thiol-thioester exchange reactions is described. Experimental analysis of the time dependent evolution of networks formed by the peptides under different conditions reveals a complex web of molecular interactions and consequent mutant replication, governed by competition for resources and by autocatalytic and/or cross-catalytic template-assisted reactions. A kinetic model, first of its kind, is then introduced, allowing simulation of varied network behaviour as a consequence of changing competition and cooperation scenarios. We suggest that by clarifying the kinetic description of these relatively complex dynamic networks, both at early stages of the reaction far from equilibrium and at later stages approaching equilibrium, one lays the foundation for studying dynamic networks out-of-equilibrium in the near future.
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http://dx.doi.org/10.1002/chem.201405195 | DOI Listing |
Biol Lett
September 2025
Evolutionary Animal Ecology, University of Bayreuth, Bayreuth, Germany.
Theoretical and empirical considerations suggest that relatedness can have complex effects on social life. While high relatedness may promote sibling cooperation and altruism through indirect fitness benefits, it can also intensify competition if siblings share similar needs and competitive strategies. Moreover, low genetic diversity in highly related groups may heighten susceptibility to pathogens.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
September 2025
Institute for Complex Molecular Systems, Eindhoven University of Technology, Eindhoven 5600 MB, The Netherlands.
Multivalent binding and the resulting dynamical clustering of receptors and ligands are known to be key features in biological interactions. For optimizing biomaterials capable of similar dynamical features, it is essential to understand the first step of these interactions, namely the multivalent molecular recognition between ligands and cell receptors. Here, we present the reciprocal cooperation between dynamic ligands in supramolecular polymers and dynamic receptors in model cell membranes, determining molecular recognition and multivalent binding via receptor clustering.
View Article and Find Full Text PDFJ Adv Res
September 2025
Institute of Big Data and Information Technology, Wenzhou University, Wenzhou 325000, China. Electronic address:
Introduction: Numerical optimization plays a key role in improving the efficiency of solar photovoltaic (PV) systems and solving complex engineering problems. Traditional optimization methods often struggle with finding optimal solutions within a reasonable timeframe due to high-dimensional and non-linear problem landscapes.
Objectives: This study aims to introduce a novel swarm intelligence algorithm, the Beaver Behavior Optimizer (BBO), inspired by the cooperative behaviors of beavers during dam construction.
Ecology
September 2025
U.S. Geological Survey, Pennsylvania Cooperative Fish and Wildlife Research Unit, The Pennsylvania State University, University Park, Pennsylvania, USA.
Invasive species are drivers of ecological change with the potential to reshape the structure and function of terrestrial and aquatic ecosystems. The invasive flathead catfish (Pylodictis olivaris) is an opportunistic predator that has established a rapidly growing population in the Susquehanna River, Pennsylvania, USA, since they were first detected in 2002. Although the predatory effects of invasive catfishes on native fish communities have been documented, the effects of invasion on riverine food webs are poorly understood.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
September 2025
Department of Biomedical Engineering, University of Connecticut Health, Farmington, CT 06030.
Coopetition is a term from game theory that describes a mix of cooperative and competitive behavior. The maternal-fetal interface (MFI) among eutherian mammals presents close interaction of two distinct individuals. These interactions have resulted in a remarkable diversity in MFI structure, often interpreted as the outcome of maternal-fetal conflict.
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