Publications by authors named "Rajib Roychowdhury"

As global populations grow and climate change increasingly disrupts agricultural systems, ensuring food security and nutritional resilience has become a critical challenge. In addition to grains and legumes, vegetables are very important for both human and animals because they contain vitamins, minerals, and fibre. Enhancing the ability of vegetables to withstand climate change threats is essential; however, traditional breeding methods face challenges due to the complexity of the genomic clonal multiplication process.

View Article and Find Full Text PDF

Wheat (Triticum spp.) is a primary dietary staple food for humanity. Many wheat genetic resources with variable genomes have a record of domestication history and are widespread throughout the world.

View Article and Find Full Text PDF

Salicylic acid (SA) is an important phytohormone, well-known for its regulatory role in shaping plant immune responses. In recent years, significant progress has been made in unravelling the molecular mechanisms underlying SA biosynthesis, perception, and downstream signalling cascades. Through the concerted efforts employing genetic, biochemical, and omics approaches, our understanding of SA-mediated defence responses has undergone remarkable expansion.

View Article and Find Full Text PDF
Article Synopsis
  • Phosphorus is essential for plant growth, and this study examined root traits in 339 maize varieties to understand how they uptake phosphorus from the soil under different phosphate conditions.
  • Genome-wide association studies identified 23 SNPs and 12 candidate genes linked to root phosphate levels and crown root number, particularly under low phosphate scenarios.
  • The research suggests potential gene targets that could enhance maize's phosphorus uptake and tolerance to low phosphate conditions, with possibilities for genetic improvement using CRISPR technology.
View Article and Find Full Text PDF
Article Synopsis
  • Maize is a vital cereal crop significantly impacted by climate change, necessitating the development of climate-smart varieties through the exploration of genetic diversity.
  • Researchers screened 96 maize inbred lines for traits linked to yield and grain quality, examining them in two environments while employing SSR markers to assess genetic diversity and trait associations.
  • Results showed positive correlations among nutritional content and yield traits, with genetic distance varied among lines, ultimately identifying distinct maize groups and specific genotypes for potential use in future breeding programs.
View Article and Find Full Text PDF

Silver nanoparticles (AgNPs) have gained significant attention in various fields due to their unique properties, but their release into the environment has raised concerns about their environmental and biological impacts. Silver nanoparticles can enter plants following their exposure to roots or via stomata following foliar exposure. Upon penetrating the plant cells, AgNPs interact with cellular components and alter physiological and biochemical processes.

View Article and Find Full Text PDF
Article Synopsis
  • Phosphate (P) is essential for plant growth, but its availability in soil can restrict development, making it important to understand how plants adapt to low P conditions.
  • This study utilizes genome-wide association studies (GWAS) on diverse tomato accessions to identify genetic factors associated with traits related to P uptake, measuring parameters like shoot height and root length under normal and low P conditions.
  • The research identified specific single nucleotide polymorphisms (SNPs) linked to key plant traits, offering insights into potential candidate genes that could be used in breeding programs to create P-efficient tomato varieties for sustainable agriculture.
View Article and Find Full Text PDF
Article Synopsis
  • Unusual temperature changes due to climate change affect crop production negatively.
  • Plants have developed complex molecular mechanisms to handle these stresses, including the use of non-coding RNAs (ncRNAs) like miRNAs, siRNAs, and lncRNAs.
  • The review discusses how these ncRNAs help plants adapt to extreme temperatures and highlights the challenges in studying their functions.
View Article and Find Full Text PDF

Rice ( L.) is an important cereal crop worldwide due to its long domestication history. North-Eastern India (NEI) is one of the origins of rice and contains various native landraces that can withstand climatic changes.

View Article and Find Full Text PDF

Mungbean [ (L.) Wilczek] is an important food, feed, and cash crop in rice-based agricultural ecosystems in Southeast Asia and other continents. It has the potential to enhance livelihoods due to its palatability, nutritional content, and digestibility.

View Article and Find Full Text PDF

Gene cloning in repeat-rich polyploid genomes remains challenging. Here, we describe a strategy for overcoming major bottlenecks in cloning of the powdery mildew resistance gene (R-gene) Pm69 derived from tetraploid wild emmer wheat. A conventional positional cloning approach was not effective owing to suppressed recombination.

View Article and Find Full Text PDF

The present day's ongoing global warming and climate change adversely affect plants through imposing environmental (abiotic) stresses and disease pressure. The major abiotic factors such as drought, heat, cold, salinity, etc., hamper a plant's innate growth and development, resulting in reduced yield and quality, with the possibility of undesired traits.

View Article and Find Full Text PDF

Lentil yield is a complicated quantitative trait; it is significantly influenced by the environment. It is crucial for improving human health and nutritional security in the country as well as for a sustainable agricultural system. The study was laid out to determine the stable genotype through the collaboration of G × E by AMMI and GGE biplot and to identify the superior genotypes using 33 parametric and non-parametric stability statistics of 10 genotypes across four different conditions.

View Article and Find Full Text PDF

Reactive oxygen species (ROS)- and hypersensitive response (HR)-mediated cell death have long been known to play critical roles in plant immunity to pathogens. Wheat powdery mildew caused by f. sp.

View Article and Find Full Text PDF

Plants interact with diverse microbial communities and share complex relationships with each other. The intimate association between microbes and their host mutually benefit each other and provide stability against various biotic and abiotic stresses to plants. Endophytes are heterogeneous groups of microbes that live inside the host tissue without showing any apparent sign of infection.

View Article and Find Full Text PDF

The nucleotide-binding site (NBS)-encoding gene is a major type of resistance (R) gene, and its diverse evolutionary patterns were analyzed in different angiosperm lineages. Until now, no comparative studies have been done on the NBS encoding genes in species. In this study, various numbers of NBS-encoding genes were identified across the whole genome of sweet potato () (#889), (#554), (#571), and (#757).

View Article and Find Full Text PDF
Article Synopsis
  • * A collaborative effort resulted in a fully annotated reference wheat genome published in 2018, followed by the release of genomes from 15 global wheat accessions in 2020, marking the start of the pan-genomic era for wheat.
  • * These developments allow for more efficient genetic analysis using advanced genotyping methods, enhancing marker-assisted selection and genomic selection, which in turn improves key traits like grain yield and stress resistance in wheat breeding.
View Article and Find Full Text PDF

Emmer wheat ( ssp. ) is one of the world's oldest domesticated crops, and it harbors a potentially rich reservoir of agronomic and nutritional quality trait variations. The growing global demand for plant-based health-food niche markets has promoted new commercial interest in ancient grains, including Emmer wheat.

View Article and Find Full Text PDF

The Near East climate ranges from arid to a Mediterranean, under which local wheat landraces have been grown for over millennia, assumingly accumulating a unique repertoire of genetic adaptations. In the current study, we subjected a subset of the Israeli Palestinian Landraces (IPLR) collection ( = 19: durum and bread wheat landraces, modern wheat cultivars, and landraces mixtures) to full-field evaluation. The multifield experiment included a semiarid site (2018-2019, 2019-2020) under low (L) and high (H) supplementary irrigation, and a Mediterranean site (2019-2020).

View Article and Find Full Text PDF

Background: For over a century, genetic diversity of wheat worldwide was eroded by continual selection for high yields and industrial demands. Wheat landraces cultivated in Israel and Palestine demonstrate high genetic diversity and a potentially wide repertoire of adaptive alleles. While most Israeli-Palestinian wheat landraces were lost in the transition to 'Green Revolution' semi-dwarf varieties, some germplasm collections made at the beginning of the 20th century survived in gene banks and private collections worldwide.

View Article and Find Full Text PDF

High temperature (HT) stress is a major environmental stress that limits plant growth, metabolism, and productivity worldwide. Plant growth and development involve numerous biochemical reactions that are sensitive to temperature. Plant responses to HT vary with the degree and duration of HT and the plant type.

View Article and Find Full Text PDF

A total of ten rare indigenous rice landraces of West Bengal were screened for germination potential and seedling growth under varying concentrations of sodium chloride (NaCl) and polyethylene glycol (PEG) solutions as osmotic stress inducing agents. Among the studied rice landraces Kelas and Bhut Moori showed highest degree of tolerance to induced osmotic stresses. Proline content of the studied lines was also determined.

View Article and Find Full Text PDF