Front Plant Sci
July 2025
Phyllospheric microorganisms play a significant role in environmental bioremediation. However, there have been limited studies to assess the detoxification mechanisms of phyllospheric in persistent organic pollutants (POPs), especially polybrominated diphenyl ethers (PBDEs). In this study, we performed RNA sequencing (RNA-seq) to identify the detoxification mechanism of 4-monobrominated diphenyl ether (BDE-3) and to identify abundant genes, differentially expressed genes, and promising candidates in phyllospheric yeast.
View Article and Find Full Text PDFPigment Cell Melanoma Res
July 2025
Protein arginine methyltransferase 6 (PRMT6), a member of the PRMT family capable of self-arginine methylation, is down-regulated in melanoma, but the specific mechanism is still unclear. Our work demonstrated that PRMT6 overexpression significantly inhibited the ability of melanoma cells to proliferate, tumorigenicity, migration, and invasion, whereas PRMT6 knockdown rescued these malignant behaviors of melanoma cells. Mechanistically, we identified aldehyde dehydrogenase 1A1 (ALDH1A1) as a critical downstream target of PRMT6.
View Article and Find Full Text PDFTwo-dimensional MXenes have emerged as exceptional electrode materials for supercapacitors (SCs), making them highly attractive for energy storage and conversion applications. However, their electrochemical performance is strongly influenced by surface terminal groups and interlayer spacing. In this study, we introduce an ultraviolet(UV)-induced nitrogen-doping method that employs UV radiation to promote the thermal decomposition of ammonium oxalate while inducing nitrogen-doping.
View Article and Find Full Text PDFInt J Syst Evol Microbiol
March 2025
A taxonomic study was conducted on four bacterial strains isolated from the soil of a coking plant. Phylogenetic analysis showed that the four strains belonged to three families: , and . Identification of the 16S rRNA gene exhibited that their sequence similarities were between 94.
View Article and Find Full Text PDFNucleic Acids Res
January 2025
Microbial culture collections play a crucial role in the collection, maintenance, and distribution of quality-assured living microbial strains, along with their associated phenotypic and omics data. To enhance the find-able, accessible, interoperable, and re-usable (FAIR) data utilization of microbial resources, the World Data Center for Microorganisms (WDCM) has developed the Global Catalogue of Microorganisms (GCM) and the Global Catalogue of Type Strains (gcType). These platforms provide interactive interfaces for cataloging the holdings of collections, along with detailed annotations of type strain genomes and curated metadata, including ecosystems, growth conditions, and collection locations.
View Article and Find Full Text PDFInt J Syst Evol Microbiol
April 2024
Two Gram-positive, rod-shaped, endospore-forming strains, YIM B05601 and YIM B05602, were isolated from soil sampled at Hamazui hot spring, Tengchong City, Yunnan Province, PR China. Phylogenetic analysis based on 16S rRNA gene sequences suggested that the two strains fell within the genus , appearing most closely related to YIM B00362 (96.9 % sequence similarity).
View Article and Find Full Text PDFFront Microbiol
November 2023
There are many unidentified microbes in polluted soil needing to be explored and nominated to benefit the study of microbial ecology. In this study, a taxonomic research was carried out on five bacterial strains which were isolated and cultivated from polycyclic aromatic hydrocarbons, and heavy metals polluted soil of an abandoned coking plant. Phylogenetical analysis showed that they belonged to the phyla and , and their 16S rRNA gene sequence identities were lower than 98.
View Article and Find Full Text PDFArch Microbiol
September 2023
A Gram-stain-negative, strictly aerobic, motile, slightly curved rod-shaped bacterium with multiple flagella, designated strain EGI 63088, was isolated from a bulk soil of Kalidium foliatum, collected from Wujiaqu in Xinjiang Uighur Autonomous Region, PR China. The optimal growth temperature, salinity, and pH for strain EGI 63088 growth were 30 °C, 3% (w/v) NaCl and 8, respectively. Phylogenetic analysis using 16S rRNA gene sequences indicated that strain EGI 63088 showed the highest sequence similarities to Halomonas heilongjiangensis 9-2 (97.
View Article and Find Full Text PDFUnlabelled: is a genus of Gram-positive bacteria known for potential industrial and agricultural applications. Here, we report the first draft genome sequence and phylogenomic analysis of a CRISPR-carrying, multidrug-resistant, novel candidate sp. NCCP-2050 isolated from agricultural soil in Pakistan.
View Article and Find Full Text PDFTwo novel strains, designated XJ19-45 and XJ19-1, were isolated from water of Kuche River in Xinjiang Uygur Autonomous Region, China. Their cells were Gram-stain-negative, aerobic and motile rods. The phylogenetic analyses based on 16S rRNA genes and genomes showed that the two isolates belonged to the genus and the closest relative was HST3-14.
View Article and Find Full Text PDFObjective: To explore the efficacy and safety of gemcitabine (GEM) combined with cisplatin (DDP) in the treatment of recurrent/metastatic nasopharyngeal carcinoma (NPC).
Methods: A total of 100 patients with recurrent/metastatic NPC treated in the First Affiliated Hospital, Hengyang Medical School, University of South China from January 2018 to March 2020 were retrospectively enrolled. Based on different chemotherapy schemes, they were assigned to an observation (Obs) group (DDP + GEM, n = 55) and a control (Con) group [DDP + FU (fluorouracil), n = 45].
Environ Sci Pollut Res Int
August 2022
Few research have focused on the potential microorganism and gene resources for plant resistance to polybrominated diphenyl ether (PBDE) and heavy metal (HM) co-contamination. The purpose of this study was to investigate the impact of phyllospheric Wickerhamomyces anomalus bioremediation ability on PBDE and HM co-contamination. The results showed that the toleration capability of W.
View Article and Find Full Text PDFA Gram-stain-positive, coccus-shaped, facultatively anaerobic, non-motile bacterial strain, designated YIM S02567, was isolated from a forest soil sample collected from Gejiu City, Yunnan Province, southwest PR China. Growth was observed at 10-45 °C, at pH 6.0-9.
View Article and Find Full Text PDFInt J Syst Evol Microbiol
October 2021
A pink, ovoid-shaped, Gram-stain-negative, strictly aerobic and motile bacterial strain, designated ROY-5-3, was isolated from an oil production mixture from Yumen Oilfield in PR China. The strain grew at 4-42 °C (optimum, 30 °C), at pH 5-10 (optimum, 7) and with 0-5 % (w/v) NaCl (optimum, 0%). The results of phylogenetic analysis based on 16S rRNA gene sequences indicated that ROY-5-3 belongs to the genus and shared the highest pairwise similarities with CW67 (98.
View Article and Find Full Text PDFPathol Res Pract
November 2021
The progression of salivary adenoid cystic carcinoma (SACC) is closely related to abnormal gene expression. Herein, the role of Sphk1 in SACC was explored. Sphk1 was overexpressed in SACC tissues.
View Article and Find Full Text PDFInt J Syst Evol Microbiol
August 2021
Two carbon dioxide-requiring, gliding, Gram-stain-negative strains, designated p1a2 and 051621, were isolated from subgingival plaque in association with severe periodontitis. The 16S rRNA gene sequence analysis revealed that they represented members of the genus and had less than 96.4 % pairwise similarity with species with validly published names in this genus.
View Article and Find Full Text PDFA bacterial strain, Gram staining negative, aerobic, long rod, motile bacterium with flagellum, designated strain YIM 98829, was isolated from the Aiding Lake in Xinjiang province, North-West China. The isolate produced oval subterminal endospores in swollen sporangia. The predominant menaquinone was MK-7.
View Article and Find Full Text PDFThe knowledge of testis development in amphibians relative to amniotes remains limited. Here, we used Xenopus laevis to investigate the process of testis cord development. Morphological observations revealed the presence of segmental gonomeres consisting of medullary knots in male gonads at stages 52-53, with no distinct gonomeres in female gonads.
View Article and Find Full Text PDFTwo nitrogen-fixing and heavy oil degrading strains, designated RWY-5-1-1 and ROY-1-1-2, were isolated from an oil production mixture from Yumen Oilfield in China. The 16S rRNA gene sequence showed they belong to Azospirillum and have less than 96.1 % pairwise similarity with each species in this genus.
View Article and Find Full Text PDFNucleic Acids Res
January 2021
Taxonomic and functional research of microorganisms has increasingly relied upon genome-based data and methods. As the depository of the Global Catalogue of Microorganisms (GCM) 10K prokaryotic type strain sequencing project, Global Catalogue of Type Strain (gcType) has published 1049 type strain genomes sequenced by the GCM 10K project which are preserved in global culture collections with a valid published status. Additionally, the information provided through gcType includes >12 000 publicly available type strain genome sequences from GenBank incorporated using quality control criteria and standard data annotation pipelines to form a high-quality reference database.
View Article and Find Full Text PDFExtensive studies have shown that estrogenic endocrine-disrupting chemicals (EDCs) can disrupt testis differentiation and even cause feminization in vertebrates. However, little is known about the mechanisms by which estrogenic EDCs disrupt testis differentiation. Here, we employed Xenopus laevis, a model amphibian species sensitive to estrogenic EDCs, to explore the molecular and cellular events by which 17β-estradiol (E2) disrupts testis differentiation and causes feminization.
View Article and Find Full Text PDF