Publications by authors named "Liulin Yang"

Background: Recurrence and metastasis are major contributors to poor prognosis in hepatocellular carcinoma (HCC), yet the mechanisms remain unclear. FAM105B, a specific deubiquitinating enzyme, is critical in various biological processes, including cancer progression. However, its role in HCC is not well understood.

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Allergic rhinitis (AR) is a nasal inflammation triggered by the immune system's response to airborne allergens, with white blood cells playing a crucial role in the development of allergic symptoms. This study aimed to investigate the genetic correlations between AR and various blood traits in European and East Asian populations using linkage disequilibrium score regression (LDSC). By leveraging GWAS summary statistics, we identified significant genetic overlap between AR and eosinophil counts in both populations.

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Background: Transforming growth factor-beta (TGF-β) plays a pivotal role in advanced hepatocellular carcinoma (HCC) by modulating immune responses, inflammatory processes, and epithelial-mesenchymal transition (EMT) in hepatocytes. It has emerged as a key therapeutic target for HCC.

Objective: This study employs bibliometric analysis to examine literature published between 2000 and 2024, aiming to explore the critical roles of TGF-β in HCC and provide a theoretical foundation for future research.

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Correction for 'Virus-like particles nanoreactors: from catalysis towards bio-applications' by Yuqing Su , , 2023, , 9084-9098, https://doi.org/10.1039/D3TB01112G.

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Objective: This study aimed to investigate the expression of BEND3 in hepatocellular carcinoma (HCC), its correlation with clinical characteristics, and its functional and mechanistic impacts on HCC progression.

Methods: Bioinformatics analyses identified BEND3 as highly expressed in HCC and associated with poor clinical prognosis, which was further validated using qRT-PCR, western blotting and immunohistochemistry. Stable BEND3-overexpressing and silenced cell lines were constructed to evaluate its functional effects.

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The complexity of multi-component molecular assembly demands precise control strategies to enhance both efficiency and selectivity. Heterogeneous nucleation and the autocatalytic secondary pathway, as key regulatory strategies, have attracted widespread attention for their crucial roles in crystal growth and amyloid protein aggregation. Here, we apply a heterogeneous nucleation strategy to supramolecular polymer systems and report the first direct observation of surface-enrichment-induced primary nucleation and a spontaneous fragmentation-driven autocatalytic secondary process.

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The assembly of peptides is generally mediated by liquid-liquid phase separation, which enables control over assembly kinetics, final structure, and functions of peptide-based supramolecular materials. Modulating phase separation can alter the assembly kinetics of peptides by changing solvents or introducing external fields. Herein, we demonstrate that the assembly of peptides can be effectively catalyzed by complex coacervates.

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Nucleation is a critical step that determines the assembly pathway and the structure and functions of the peptide assemblies. However, the dynamic evolution of interactions between nucleating agents and peptides, as well as between peptides themselves during the nucleation process, remains elusive. Herein, we show that the heterogeneous nucleating agent carboxymethylcellulose (CMC) can promote the nucleation of Aβ (KF) peptide.

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Toehold-mediated strand displacement (TMSD) provides a versatile toolbox for developing DNA digital computing systems. Although different logic circuits with diverse functions have achieved good performance in terms of complexity and scalability, most previous DNA logic circuits perform information processing only at the molecular level, and nonspecific signal leakages are often difficult to avoid. Here, we demonstrate the feasibility of constructing leakless digital computing systems in three-dimensionally ordered colloidal supercrystals.

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Article Synopsis
  • Understanding the kinetic modulation of toehold-mediated DNA strand displacements (TMSD) is crucial for advances in DNA nanotechnology, as the toehold sequence impacts the kinetics significantly.
  • Machine learning was used to analyze the complex relationship between TMSD kinetics and the toehold sequence, revealing key factors that influence rate constants, such as the number of free hydrogen bonding sites and bases.
  • A predictive model was developed that accurately estimates TMSD rate constants, even accommodating subtle variations in toehold sequences.
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Iodine radioisotopes, produced or released during nuclear-related activities, severely affect human health and the environment. The efficient removal of radioiodine from both aqueous and vapor phases is crucial for the sustainable development of nuclear energy. In this study, we propose an "N-heteroatom engineering" strategy to design three porous organic cages with N-containing functional groups for efficient iodine capture.

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Article Synopsis
  • Molecular assembly involves organizing individual molecules into larger structures, and while self-assembly has been the predominant method, many biological complexes are actually formed through catalysed assembly by other molecules.
  • This review highlights the mechanisms behind these catalysed-assembly phenomena, as well as related concepts like catalysed-disassembly and catalysed-reassembly.
  • The findings suggest that focusing solely on self-assembly can limit advancements in artificial molecular assembly, and the review proposes guidelines for creating artificial systems inspired by biological catassembly, ultimately aiming to enhance our understanding and capabilities in molecular assembly.
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Virus-like particles (VLPs) are self-assembled supramolecular structures found in nature, often used for compartmentalization. Exploiting their inherent properties, including precise nanoscale structures, monodispersity, and high stability, these architectures have been widely used as nanocarriers to protect or enrich catalysts, facilitating catalytic reactions and avoiding interference from the bulk solutions. In this review, we summarize the current progress of virus-like particles (VLPs)-based nanoreactors.

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Article Synopsis
  • The study focuses on controlling chirality in dynamic molecular systems, specifically through the synthesis of a face-rotating tetrahedron (FRT) that can toggle between different chiral forms.
  • Researchers found that the presence of fluoride ions can adjust the energy barrier for the FRT's transformation between enantiomers, allowing for in situ control.
  • The introduction of an enantiopure phenylethanol facilitates the preferential binding to a specific conformer of the FRT, effectively inducing chirality and showcasing potential applications in asymmetric synthesis and dynamic stereochemistry.
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The development of conjugated polymers especially n-type polymer semiconductors is powered by the design and synthesis of electron-deficient building blocks. Herein, a strong acceptor building block with di-metallaaromatic structure was designed and synthesized by connecting two electron-deficient metallaaromatic units through a π-conjugated bridge. Then, a double-monomer polymerization methodology was developed for inserting it into conjugated polymer scaffolds to yield metallopolymers.

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A generic strategy to construct virus protein-based hybrid nanomaterials is reported by using a macromolecular glue inspired by mussel adhesion. Commercially available poly(isobutylene--maleic anhydride) (PiBMA) modified with dopamine (PiBMAD) is designed as this macromolecular glue, which serves as a universal adhesive material for the construction of multicomponent hybrid nanomaterials. As a proof of concept, gold nanorods (AuNRs) and single-walled carbon nanotubes (SWCNTs) are initially coated with PiBMAD.

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The rational design of stimuli-responsive materials requires a deep understanding of the structure-activity relationship. Herein, we proposed an intramolecular conformation-locking strategy─incorporating flexible tetraphenylethylene (TPE) luminogens into the rigid scaffold of a molecular cage─to produce a molecular photoswitch with dual outputs of luminescence and photochromism in solution and in the solid states at once. The molecular cage scaffold, which restricts the intramolecular rotations of the TPE moiety, not only helps to preserve the luminescence of TPE in a dilute solution but facilitates the reversible photochromism on account of the intramolecular cyclization/cycloreversion reactions.

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Inspired by life assembly systems, the construction of transient assembly systems with spatiotemporal control is crucial for developing intelligent materials. A widely adopted strategy is to couple the self-assembly with chemical reaction networks. However, orchestrating the kinetics of multiple reactions and assembly/disassembly processes without crosstalk in homogeneous solutions is not an easy task.

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Trace water in organic solvents can play a crucial role in the construction of supramolecular assemblies, which has not gained enough attention until very recent years. Herein, we demonstrate that residual water in organic solvents plays a decisive role in the regulation of the evolution of assembled structures and their functionality. By adding Mg(ClO) into a multi-component organic solution containing terpyridine-based ligand and monodentate imidazole-based ligand , the system underwent an unexpected kinetic evolution.

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Kinetic control over structures and functions of complex assembly systems has aroused widespread interest. Understanding the complex pathway and transient intermediates is helpful to decipher how multiple components evolve into complex assemblies. However, for supramolecular polymerizations, thorough and quantitative kinetic analysis is often overlooked.

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Conjugated polymers usually require strategies to expand the range of wavelengths absorbed and increase solubility. Developing effective strategies to enhance both properties remains challenging. Herein, we report syntheses of conjugated polymers based on a family of metalla-aromatic building blocks via a polymerization method involving consecutive carbyne shuttling processes.

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Article Synopsis
  • Molecular face-rotating polyhedra (FRP) are complex structures, and earlier attempts to create stereocontrolled FRP resulted in losing their inner space, which limits their usefulness in host-guest interactions.
  • Through a rational design method, researchers successfully developed hollow FRP with high diastereoselectivity, allowing for better manipulation of their assembly.
  • By understanding and adjusting the van der Waals repulsive forces between the building blocks, this study presents a new strategy for assembling pure organic cages, enhancing the potential applications of chiral materials.
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Interface engineering is a critical method by which to efficiently enhance the photovoltaic performance of nonfullerene solar cells (NFSC). Herein, a series of metal-nanographene-containing large transition metal involving d -p conjugated systems by way of the addition reactions of osmapentalynes and p-diethynyl-hexabenzocoronenes is reported. Conjugated extensions are engineered to optimize the π-conjugation of these metal-nanographene molecules, which serve as alcohol-soluble cathode interlayer (CIL) materials.

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Quantitatively predicting the reactivity of dynamic covalent reaction is essential to understand and rationally design complex structures and reaction networks. Herein, the reactivity of aldehydes and amines in various rapid imine formation in aqueous solution by microfluidic NMR spectroscopy was quantified. Investigation of reaction kinetics allowed to quantify the forward rate constants k by an empirical equation, of which three independent parameters were introduced as reactivity parameters of aldehydes (S , E) and amines (N).

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Interfacial host-guest complexation offers a versatile way to functionalize nanomaterials. However, the complicated interfacial environment and trace amounts of components present at the interface make the study of interfacial complexation very difficult. Herein, taking the advantages of near-single-molecule level sensitivity and molecular fingerprint of surface-enhanced Raman spectroscopy (SERS), we reveal that a cooperative effect between cucurbit[7]uril (CB[7]) and methyl viologen (MV2I) in aggregating Au NPs originates from the cooperative adsorption of halide counter anions I, MV, and CB[7] on Au NPs surface.

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