5 results match your criteria: "the Netherlands. ali@lacdr.leidenuniv.nl.[Affiliation]"

Current drug discovery is limited by the lack of single-cell data on drug uptake, metabolism, and effects, as population-level methods obscure cellular heterogeneity. While single-cell RNA sequencing has revealed drug resistance mechanisms, it cannot simultaneously measure drug concentrations and cellular responses. Raman spectroscopy probes single-cell drug effects but lacks sensitivity for drug or its metabolite quantification, whereas single-cell mass spectrometry (MS) offers high sensitivity but consumes samples, preventing repeated measurements.

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Lipid dysregulation in triple negative breast cancer: Insights from mass spectrometry-based approaches.

Prog Lipid Res

April 2025

Metabolomics and Analytics Center, Leiden Academic Centre for Drug Research, Leiden University, 2333 CC Leiden, The Netherlands.

Triple negative breast cancer (TNBC) has the worst prognosis among breast cancers due to its aggressive nature and the absence of targeted treatments. Development of novel anti-cancer drugs for TNBC faces challenges stemming from its heterogeneity and high potential for metastasis. Metabolomics can be a useful technology in finding novel therapeutic targets and probing the heterogeneity of TNBC.

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Article Synopsis
  • Lipid metabolism plays a crucial role in the progression of triple-negative breast cancer (TNBC), which is particularly aggressive and poses a high risk for women.
  • The study focused on the relationship between epithelial-to-mesenchymal transition (EMT) and lipid profiles in TNBC cells, highlighting the decrease of the epithelial marker EpCAM during this process.
  • Through lipidomic profiling and mass spectrometry, researchers found distinct lipid profiles linked to varying levels of EpCAM expression, suggesting that lower lysophatidylethanolamine (LPE) levels may influence EMT regulation in TNBC.
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Background: Live single-cell metabolomic studies encounter inherent difficulties attributed to the limited sample volume, minimal compound quantity, and insufficient sensitivity in the Mass Spectrometry (MS) method used to obtain single-cell data. However, understanding cellular heterogeneity, functional diversity, and metabolic processes within individual cells is essential. Exploring how individual cells respond to stimuli, including drugs, environmental changes, or signaling molecules, offers insights into biology, oncology, and drug discovery.

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Single-cell metabolomics by mass spectrometry: ready for primetime?

Curr Opin Biotechnol

August 2023

Metabolomics and Analytics Center, Leiden Academic Centre of Drug Research, Leiden University, Leiden, the Netherlands. Electronic address:

Single-cell metabolomics (SCMs) is a powerful tool for studying cellular heterogeneity by providing insight into the differences between individual cells. With the development of a set of promising SCMs pipelines, this maturing technology is expected to be widely used in biomedical research. However, before SCMs is ready for primetime, there are some challenges to overcome.

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