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Flooding significantly threatens global agricultural productivity, especially under the pressures of climate change. To address this urgent environmental challenge, the development of flooding-tolerant crops is imperative. However, our understanding of the molecular mechanisms underlying flooding tolerance in plants, particularly in crops, remains limited. Our findings demonstrate natural variation in submergence tolerance among diverse sorghum populations. Comparative transcriptomic analyses reveal that the submergence-tolerant accession SC473 exhibits a lower abundance of SbmiR528, a monocot-specific microRNA, compared with its sensitive counterpart SC449. This reduction correlates with an increased accumulation of Superoxide dismutase 2 (SOD2) transcript, which encodes one of the reactive oxygen species (ROS)-scavenging enzymes. We further reveal that the transcription factor SbWRKY76 directly binds the SbMIR528 promoter to activate its transcription. Notably, SbWRKY76 expression is significantly elevated in the submergence-sensitive variety SC449. Overexpression of either SbWRKY76 or SbMIR528 in sorghum results in reduced submergence tolerance. This study represents the first identification of the SbWRKY76-SbmiR528-SbSOD2 module as a novel regulatory axis governing sorghum submergence response by fine-tuning ROS scavenging. These findings offer pivotal targets for breeding or engineering climate-resilient crops to mitigate flooding impacts.
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http://dx.doi.org/10.1111/nph.70542 | DOI Listing |
3 Biotech
October 2025
ICAR-National Rice Research Institute, Cuttack, Odisha 753006 India.
Just as Gregor Mendel's laws of inheritance laid the foundation for modern genetics, the emergence of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)/Cas systems has catalyzed a new era in precision genome engineering. CRISPR/Cas has revolutionized rice ( L.) breeding by enabling precise, transgene-free edits to improve yield, nutrition, and stress tolerance.
View Article and Find Full Text PDFNew Phytol
September 2025
Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, 266101, China.
Flooding significantly threatens global agricultural productivity, especially under the pressures of climate change. To address this urgent environmental challenge, the development of flooding-tolerant crops is imperative. However, our understanding of the molecular mechanisms underlying flooding tolerance in plants, particularly in crops, remains limited.
View Article and Find Full Text PDFJ Plant Physiol
August 2025
Key Laboratory for Bio-resources and Eco-environment & State Key Lab of Hydraulics & Mountain River Engineering, Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, Key Laboratory for Bio-resource and Eco-environment of Ministry of Education, College of Life Sciences, S
Submergence-induced hypoxia stress hampers plant growth and yield, yet its molecular mechanisms remain elusive. Here, we found that ETP1/2 are repressed by submergence stress and negatively regulate plant tolerance to submergence. Further analysis showed that the repression of ETP1/2 during the submergence response is at least partly caused by the decreased expression of ARR1/12, as ARR1/12 can directly bind to the promoters via the AGATTTG motifs to activate ETP1/2 expression.
View Article and Find Full Text PDFBMC Plant Biol
September 2025
Cereal Crops Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Background: Submergence stress is a major obstacle limiting the application of direct seeding in rice cultivation. Therefore, understanding the genetic basis of submergence tolerance in rice is of great significance for identifying favorable genes and developing superior rice varieties. However, few studies have focused on submergence tolerance during seed germination; thus, the genetic basis of submergence tolerance at this stage deserves more attention.
View Article and Find Full Text PDFPlant Physiol
September 2025
Assistant Features Editor, Plant Physiology, American Society of Plant Biologists.