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Background: To explore the efficacy of a deep learning (DL) model in predicting perineural invasion (PNI) in prostate cancer (PCa) by conducting multiparametric MRI (mpMRI)-based tumor heterogeneity analysis.
Methods: This retrospective study included 397 patients with PCa from two medical centers. The patients were divided into training, internal validation (in-vad), and independent external validation (ex-vad) cohorts (n = 173, 74, and 150, respectively). mpMRI-based habitat analysis, comprising T2-weighted imaging, diffusion-weighted imaging, and apparent diffusion coefficient sequences, was performed followed by DL, deep feature selection, and filtration to compute a radscore. Subsequently, six models were constructed: one clinical model, four habitat models (habitats 1, 2, 3, and whole-tumor), and one combined model. Receiver operating characteristic curve analysis was performed to evaluate the models' ability to predict PNI.
Results: The four habitat models exhibited robust performance in predicting PNI, with area under the curve (AUC) values of 0.862-0.935, 0.802-0.957, and 0.859-0.939 in the training, in-vad, and ex-vad cohorts, respectively. The clinical model had AUC values of 0.832, 0.818, and 0.789 in the training, in-vad, and ex-vad cohorts, respectively. The combined model outperformed the clinical and habitat models, with AUC, sensitivity, and specificity values of 0.999, 1, and 0.955 for the training cohort. Decision curve analysis and clinical impact curve analysis indicated favorable clinical applicability and utility of the combined model.
Conclusion: DL models constructed through mpMRI-based habitat analysis accurately predict the PNI status of PCa.
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http://dx.doi.org/10.1186/s12885-025-14759-9 | DOI Listing |
J Neurooncol
September 2025
Department of Radiology, The Affiliated Hospital of Qingdao University, Qingdao, 266003, Shandong, China.
Rationale And Objectives: Double expression lymphoma (DEL) is an independent high-risk prognostic factor for primary CNS lymphoma (PCNSL), and its diagnosis currently relies on invasive methods. This study first integrates radiomics and habitat radiomics features to enhance preoperative DEL status prediction models via intratumoral heterogeneity analysis.
Materials And Methods: Clinical, pathological, and MRI imaging data of 139 PCNSL patients from two independent centers were collected.
Appl Microbiol Biotechnol
September 2025
School of Plant Sciences, The University of Arizona, 1140 E South Campus Drive, Forbes 303, Tucson, AZ, 85721, USA.
Fungal endophytes and epiphytes associated with plant leaves can play important ecological roles through the production of specialized metabolites encoded by biosynthetic gene clusters (BGCs). However, their functional capacity, especially in crops like lettuce (Lactuca sativa L.), remains poorly understood.
View Article and Find Full Text PDFCurr Genet
September 2025
Fermentation and Microbial Biotechnology Division, CSIR-Indian Institute of Integrative Medicine, Canal Road, Jammu-Tawi, 180001, India.
Trichoderma species exhibit remarkable versatility in adaptability and in occupying habitats with lifestyles ranging from mycoparasitism and saprotrophy to endophytism. In this study, we present the first high-quality whole-genome assembly and annotation of T. lixii using Illumina HiSeq technology to explore the mechanisms of endophytic lifestyle and plant colonization.
View Article and Find Full Text PDFJ Acoust Soc Am
September 2025
NATO Centre for Maritime Research and Experimentation, La Spezia 19126, Italy.
The Atlantification of the Arctic is driving a northward habitat shift of many cetaceans, including sperm whales (Physeter macrocephalus). As Arctic warming continues to decrease sea ice extent and contributes to the change in species distributions, it is crucial to study how the distribution patterns, habitat, and the demographic structure of sperm whale populations may continue to change. In this study, we assess the temporal presence of echolocating sperm whales on the continental slope southwest of the Svalbard archipelago and compare it with acoustic backscatter and temperature as a proxy for biomass.
View Article and Find Full Text PDFAppl Environ Microbiol
September 2025
Department of Biological Sciences, Centro de Investigaciones Microbiológicas, Universidad de los Andes, Bogotá, Colombia.
Megadiverse countries, which collectively harbor over 70% of the planet's terrestrial biodiversity, play a crucial role in global conservation efforts. However, many of these nations, primarily in the developing world, face significant environmental challenges that threaten biodiversity, including pollution, habitat loss, and climate change. Among these issues, pollution-driven by industrialization, agriculture, and improper waste disposal-has emerged as a critical concern, particularly for water and soil ecosystems.
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