A PHP Error was encountered

Severity: Warning

Message: file_get_contents(https://...@gmail.com&api_key=61f08fa0b96a73de8c900d749fcb997acc09&a=1): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests

Filename: helpers/my_audit_helper.php

Line Number: 197

Backtrace:

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 197
Function: file_get_contents

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 271
Function: simplexml_load_file_from_url

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 3165
Function: getPubMedXML

File: /var/www/html/application/controllers/Detail.php
Line: 597
Function: pubMedSearch_Global

File: /var/www/html/application/controllers/Detail.php
Line: 511
Function: pubMedGetRelatedKeyword

File: /var/www/html/index.php
Line: 317
Function: require_once

Genome-wide identification of family genes in sweet potato ( L.) and their expression patterns under abiotic stress. | LitMetric

Genome-wide identification of family genes in sweet potato ( L.) and their expression patterns under abiotic stress.

Front Genet

Jiangxi Province Key Laboratory of Oil Crops Genetic Improvement, Institute of Crops, Jiangxi Academy of Agricultural Sciences, Nanchang, China.

Published: July 2025


Category Ranking

98%

Total Visits

921

Avg Visit Duration

2 minutes

Citations

20

Article Abstract

GATAs, a type of zinc finger protein transcription factors, can bind to DNA regulatory regions to control the expression of target genes, thereby affecting plant growth and development under normal conditions or environmental stress. However, the gene family has not been identified in sweet potato. In this study, a total of 35, 33, 34, 39, 63, and 56 genes were identified in sweet potato, , , , , and , respectively. Phylogenetic analysis categorized the genes into six groups according to their distinct features, and this classification was validated by the structural characteristics of exons/introns and conserved motif analysis. The -acting elements located in the promoter regions were also found to be enriched with biotic and abiotic responsive elements, which may play a pivotal role in plant stress adaptation. Then the gene duplication events and synteny between the genome of sweet potato and those of , , , , and were analyzed, which provided insights into evolutionary mechanisms. Moreover, expression pattern analysis was performed on genes, many of which were significantly induced by multiple types of abiotic stress, which may render these genes candidates for molecular breeding strategies in sweet potato. Overall, this experiment conducted a systematic exploration of genes by investigating their evolutionary relationships, structural characteristics, functional properties, and expression patterns, thereby establishing a theoretical foundation for further in-depth research on the features of the gene family.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC12326740PMC
http://dx.doi.org/10.3389/fgene.2025.1635749DOI Listing

Publication Analysis

Top Keywords

sweet potato
20
expression patterns
8
abiotic stress
8
gene family
8
identified sweet
8
structural characteristics
8
genes
7
sweet
5
potato
5
genome-wide identification
4

Similar Publications