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Two-photon absorption (2PA) spectroscopy, which involves the simultaneous absorption of a pair of photons, is an important area of research in chemical biology, where a diversity of biological chromophores have been explored for 2PA applications. This work offers a perspective on how electrostatic interactions influence the 2PA response of fluorescent protein (FP) chromophores, demonstrating the role of their surrounding environment in modulating 2PA optical properties. In this work, we present electrostatic tuning maps, created by placing partial charges along the van der Waals radii of eight different chromophores: Green FP (neutral and anion), Red FP (neutral and anion), mBlueberry FP, Kusabira orange FP, and two noncanonical chromophores, a hydroxyquinolone derivative, and the chromophore of Gold FP. 2PA cross sections (σ) were calculated at the CAM-B3LYP/aug-cc-pVDZ level of theory with and without the presence of point charges. The results show that the influence of point charges varies with their location, leading to substantial increases or decreases in the obtained σ. For the studied systems, neutral chromophores tend to increase their σ when positive point charges are present close to the imidazolinone group, while lowering their σ when they are present near the benzylidene ring. In contrast, anionic species show an opposite trend. Using a positive or negative point charge has the opposite effect as well, increasing or decreasing σ by relatively the same amount. These maps aid in understanding how electrostatic interactions influence 2PA responses, providing a framework for guiding structural modifications to the protein environment as well as the design and optimization of 2PA probes.
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http://dx.doi.org/10.1021/acs.jpca.5c03680 | DOI Listing |
Langmuir
September 2025
Laboratory of Electrochemistry-Corrosion, Metallurgy and Inorganic Chemistry, Faculty of Chemistry, USTHB, BP 32, 16111, Algiers, Algeria.
Azo dyes, prevalent in various industries, including textile dyeing, food, and cosmetics, pose significant environmental and health risks due to their chemical stability and toxicity. This study introduces the synthesis and application of a copper hydrogen-π-bonded benzoate framework (Cu-HBF) and its derived marigold flower-like copper oxide (MFL-CuO) in a synergetic adsorption-photocatalytic process for efficiently removing cationic azo dyes from water, specifically crystal violet (CV), methylene blue (MB), and rhodamine B (RhB). The Cu-HBF, previously available only in single crystal form, is prepared here as a crystalline powder for the first time, using a low-cost and facile procedure, allowing its application as an adsorbent and also serving as a precursor for synthesizing well-structured copper oxide (MFL-CuO).
View Article and Find Full Text PDFJ Chem Theory Comput
September 2025
Materials DX Research Center, National Institute of Advanced Industrial Science and Technology, Tsukuba Central 2, 1-1-1 Umezono, Tsukuba, Ibaraki 305-8568, Japan.
The quantum mechanics/molecular mechanics (QM/MM) method is a powerful approach for investigating solid surfaces in contact with various types of media, since it allows for flexible modeling of complex interfaces while maintaining an all-atom representation. The mean-field QM/MM method is an average reaction field model within the QM/MM framework. The method addresses the challenges associated with the statistical sampling of interfacial atomic configurations of a medium and enables efficient calculation of free energies.
View Article and Find Full Text PDFJ Am Chem Soc
September 2025
Division of Chemistry and Chemical Engineering, Arthur Amos Noyes Laboratory of Chemical Physics, California Institute of Technology, Pasadena, California 91125, United States.
Coherent electron spin states within paramagnetic molecules hold significant potential for microscopic quantum sensing. However, all-optical coherence measurements amenable to high spatial and temporal resolution under ambient conditions remain a significant challenge. Here we conduct room-temperature, picosecond time-resolved Faraday ellipticity/rotation (TRFE/R) measurements of the electron spin decoherence time in [IrBr].
View Article and Find Full Text PDFLangmuir
September 2025
Department of Materials Science and Engineering, Drexel University, Philadelphia, Pennsylvania 19104, United States.
The surfaces of 1D layered lepidocrocite-structured titanates (1DLs) are negatively charged due to an oxygen-to-titanium atomic ratio >2. This, and their layered structure, allow for facile ion exchange and high colloidal stability, demonstrated by ζ-potentials of ≈ -85 mV at their unadjusted pH of ≈10.4.
View Article and Find Full Text PDFJ Chem Theory Comput
September 2025
Department of Chemistry, University of California, Berkeley, California 94720, United States.
We investigate the ability of Aufbau suppressed coupled cluster theory to act as a post-linear-response correction to widely used linear response methods for electronically excited states. We find that the theory is highly resilient to shortcomings in the underlying linear response method, with final results from less accurate starting points nearly as good as those from the best starting points. This pattern is especially stark in charge transfer states, where the approach converts starting points with multi-eV errors into post-linear-response results with errors on the order of 0.
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