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Although natural products constitute one of the crucial sources for drug development and new drug research, the traditional screening methods are often time-consuming and exhibit low accuracy. To address this issue, a more efficient and precise ligand fishing-bound high resolution mass spectrometry coupled molecular dynamics technology is employed. This study introduces a chitosan-modified magnetic graphene oxide composite (MGO/CS) that enhances ligand fishing through superior protein binding capacity. The results revealed that MGO/CS manifested considerable loading capacity and stability, the loading capacity of MGO/CS can reach 1.5 times that of GO. Moreover, compared with MGO, MGO/CS exhibits a protein immobilization rate that is 20 % higher. Additionally, CMP@MGO/CS still sustained a constant loading rate of 70 % after 7 days at 4 °C. Subsequently, high-performance liquid chromatography-hybrid linear ion trap/orbitrap mass spectrometry was utilized to screen the potential active substances binding to fibrotic VEGFR-2 protein in Cordyceps sinensis. To verify the accuracy of the screening of the compounds binding to VEGFR-2 protein, molecular docking simulation and biological validation were conducted. Functional assays demonstrated that inosine and uridine significantly reversed TGF-β1-induced mesenchymal-like morphological alterations in pulmonary fibrosis models, as evidenced by quantitative restoration of epithelial cobblestone morphology. This research offers an efficient, efficacious and convenient approach for the discovery of active ingredients in natural products.
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http://dx.doi.org/10.1016/j.bioorg.2025.108787 | DOI Listing |
Bioorg Chem
August 2025
State Key Laboratory of Quality Research in Chinese Medicines & Faculty of Chinese Medicine, Macau University of Science and Technology, Macau 999078, China. Electronic address:
Although natural products constitute one of the crucial sources for drug development and new drug research, the traditional screening methods are often time-consuming and exhibit low accuracy. To address this issue, a more efficient and precise ligand fishing-bound high resolution mass spectrometry coupled molecular dynamics technology is employed. This study introduces a chitosan-modified magnetic graphene oxide composite (MGO/CS) that enhances ligand fishing through superior protein binding capacity.
View Article and Find Full Text PDFInt J Biol Macromol
May 2025
School of Food Science and Engineering, Shaanxi University of Science and Technology, Xi'an 710021, China. Electronic address:
Efficient separation and purification of bioactive components from medicine-food homologous plants represent a key challenge in natural product development. To address the cumbersome, time-consuming, and costly drawbacks of traditional flavonoid extraction techniques, this study developed a novel ultrasound-assisted magnetic dispersive solid-phase extraction method (UA-MSPE). Chitosan-modified FeO magnetic composite microspheres (CS@FeOCMs) were employed as functional adsorbents with 70 % methanol solution as the desorbent to achieve selective separation and enrichment of catechol-containing flavonoids from Flos sophorae immaturus (FSI).
View Article and Find Full Text PDFAnal Biochem
July 2025
College of Biological Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China. Electronic address:
Here, we describe the applicability of a variety of functionalized magnetic beads (MBs) for DNA extraction under different lysis conditions. Various MBs, including hydroxyl, carboxylic, amino, chitosan-modified, and streptomycin-modified MBs (MBs-STR), were compared based on their extracted DNA quantity and quality. The results presented that the MBs exhibited different DNA adsorption capacities under specific conditions.
View Article and Find Full Text PDFInt J Biol Macromol
May 2025
Xianyang Normal University, Xianyang 712000, PR China.
Microplastics (MPs) are an emerging threat to terrestrial ecosystems and have attracted global attention. In this study, durian shell was used as biochar raw material to provide magnetism, and then it was modified with chitosan to make chitosan-modified magnetic biochar (CMBC). The prepared CMBC was used to simulate the adsorption of MPs in sewage.
View Article and Find Full Text PDFEnviron Pollut
March 2025
Department of Civil and Environmental Engineering, Indian Institute of Technology Patna, Bihar, 801 106, India. Electronic address:
Perfluorooctanoic acid (PFOA) removal has gained significant attention due to its environmental stability and potential toxicity. This study aims to synthesize a chitosan-modified magnetic biochar (CS_MBC) for efficient PFOA removal from aqueous solutions. Various CS loading ratios (0.
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