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Non-small cell lung cancer (NSCLC) is a leading cause of cancer-related deaths worldwide. Despite advancements in treatment, prognosis for patients with advanced stages remains poor. Metabolic reprogramming in the tumor microenvironment, particularly abnormal glycolysis, plays a crucial role in immune evasion and treatment response. We collected nine single-cell datasets to create a single-cell atlas of CD8 + T cells from 89 NSCLC patients, revealing ten distinct states of these cells. We employed a multimodal data analysis approach, integrating bulk transcriptomics, single-cell transcriptomics, spatial transcriptomics, and proteomics. Using 117 machine learning models, we identified key genes associated with NSCLC metastasis. Notably, the StepCox[forward] + Lasso model was instrumental in pinpointing key genes that significantly impact disease prognosis. Our analysis revealed that LTB + LDHA + CD8 + T cells have a distinct metabolic and immune phenotype, characterized by enhanced glycolysis and elevated lactate production. This not only facilitates tumor cell migration and invasion but also impairs the cytotoxic function of CD8 + T cells. Furthermore, our machine learning models identified four key genes significantly associated with NSCLC metastasis: TBCD, PTPRC, LDHA, and ACTR2. Of these, high LDHA expression was strongly linked to poorer responses to immunotherapy and a higher risk of therapy resistance. LTB + LDHA + CD8 + T cells also reduced antitumor immune responses by inhibiting the secretion of effector molecules like GNLY. Additionally, elevated LDHA expression was associated with reduced CD8 + T cell infiltration, which further promotes tumor immune evasion. This study highlights the heterogeneity of CD8 + T cells in NSCLC, emphasizing the unique role of the LTB + CD8 + Tn subpopulation in metastasis. LDHA is identified as a critical key gene with a significant impact on immunotherapy outcomes, presenting a potential therapeutic target. These insights offer new biomarkers and targeted strategies for personalized immune therapy.
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http://dx.doi.org/10.1038/s41598-025-87361-5 | DOI Listing |
Curr Dev Nutr
March 2024
Department of Cancer AI & Digital Health, Graduate School of Cancer Science and Policy, Goyang-si, Gyeonggi-do, South Korea.
Background: Glucose is a main source of energy for tumor cells. Thus, a low-carbohydrate diet (LCD) is thought to make a significant contribution to cancer prevention. In addition, LCD and HECT domain E3 ubiquitin protein ligase 4 (HECTD4) gene may be related to insulin resistance.
View Article and Find Full Text PDFHum Genomics
July 2022
Department of Laboratory Medicine, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 201801, China.
Background: Spinocerebellar ataxia type 1 (SCA1) is a neurodegenerative disease caused by a polyglutamine expansion in the ataxin-1 protein. The pathogenic mechanism resulting in SCA1 is still unclear. Protein-protein interactions affect the function and stability of ataxin-1.
View Article and Find Full Text PDFArq Bras Cardiol
April 2022
Universidade de São Paulo,São Paulo, SP - Brasil.
Background: Neutrophil-to-lymphocyte ratio (NLR) has been proposed as an inflammatory marker that might be associated with coronary atherosclerosis, although most of the current data is restricted to the acute setting. Additionally, the association of NLR with extracoronary atherosclerosis and stable disease remains unclear.
Objective: To analyze the association between NLR and abdominal aortic atherosclerosis (AAAt).
J Cell Biochem
November 2019
Department of Neurosurgery, The Affiliated Hospital of Southwest Medical University, Luzhou, Sichuan, China.
Background: This study aimed to study the effect and underlying molecular mechanisms of single-nucleotide polymorphism (SNP) rs767649 during the pathogenesis of intracranial aneurysm (IA) rupture.
Method: Real-time PCR and Western blot analysis were performed to detect the differentiated expression of miR-155 and matrix metalloproteinase-2 (MMP-2) among different sample groups. Computational analysis and luciferase assay were conducted to study the effect of SNP rs767649 on the expression of miR-155 as well as the regulatory relationship between miR-155 and MMP-2.
Cancer Med
August 2018
Shenzhen Key Laboratory of Viral Oncology, the Clinical Innovation & Research Center (CIRC), Shenzhen Hospital, Southern Medical University, Shenzhen, China.