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Hepatocellular carcinoma (HCC) is one of the most prevalent malignant tumors worldwide. The intricate molecular processes that drive the development and advancement of HCC are still not entirely clear. Recent studies have implicated the 11 protein subunits of ribonuclease P (POP1, POP4, POP5, POP7, RPP14, RPP21, RPP25, two copies of RPP30, RPP38, and RPP40) in various cancers, yet their specific roles in HCC require further clarification. In this study, we found that elevated levels of ribonuclease P/MRP Subunit P40 (RPP40) are associated with a worse outcome for HCC patients. RPP40 promotes proliferation, migration and invasion in HCC cells. Our findings reveal that RPP40 can coordinate the transcription of ribosomal RNA and the expression of ribosomal genes, thereby promoting the malignancy of HCC. Our findings provide preliminary evidence that RPP40 could be considered a candidate target for HCC therapy.
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http://dx.doi.org/10.1016/j.gene.2025.149622 | DOI Listing |
Nucleic Acids Res
August 2025
Department of Biochemistry, University of California, Riverside, CA 92521, United States.
Ribonuclease (RNase) MRP is a conserved RNA-based enzyme best known for its essential role in the maturation of ribosomal RNA (rRNA) in eukaryotes. However, the composition and RNA substrate specificity of this multisubunit ribonucleoprotein complex in higher eukaryotes remain a mystery. Here, we identify NEPRO and C18ORF21 (which we renamed RMP64 and RMP24, respectively) as constitutive subunits of metazoan RNase MRP.
View Article and Find Full Text PDFGene
September 2025
Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Medical Research Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou 510120, China; Department of Pediatrics, Sun Yat-sen Memorial Hospi
Hepatocellular carcinoma (HCC) is one of the most prevalent malignant tumors worldwide. The intricate molecular processes that drive the development and advancement of HCC are still not entirely clear. Recent studies have implicated the 11 protein subunits of ribonuclease P (POP1, POP4, POP5, POP7, RPP14, RPP21, RPP25, two copies of RPP30, RPP38, and RPP40) in various cancers, yet their specific roles in HCC require further clarification.
View Article and Find Full Text PDFCell Rep
June 2025
Department of Genetics and Biochemistry, Clemson University, Clemson, SC 29631, USA; Clemson University Center for Human Genetics, Greenwood, SC 29646, USA. Electronic address:
Human RNase MRP is a ribonucleoprotein (RNP) enzyme that processes precursor rRNA (pre-rRNA) at ITS1 site 2 and may have additional activities. It is an endonuclease related to RNase P, which processes pre-tRNAs and pre-tRNA-like substrates. In Saccharomyces cerevisiae, these two RNPs utilize distinct catalytic RNAs with eight shared and one or two specific protein subunits.
View Article and Find Full Text PDFbioRxiv
January 2025
Dept. of Genetics and Biochemistry, Clemson University, Clemson, SC 29631, USA.
All known protein components of one of the longest-studied human ribonucleoprotein ribozyme nuclear Ribonuclease MRP (RNase MRP), which processes pre-rRNA at ITS1 site 2, are shared with Ribonuclease P (RNase P), which cleaves pre-tRNA 5' leader sequences. Our genome-wide forward genetic screening identified two poorly characterized human genes, which we named RPP24 and RPP64. We show that these two genes are required for pre-rRNA ITS1 site 2 processing and their protein products efficiently associate with RNA MRP.
View Article and Find Full Text PDFJ Biol Chem
March 2024
Ninth People's Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China; Shanghai Institute of Precision Medicine, Shanghai, China; State Key Laboratory of Oncogenes and Related Genes, Shanghai Jiao Tong University School of Medicine, Shanghai, China. Electronic address: leim@shsm
RNase P and RNase mitochondrial RNA processing (MRP) are ribonucleoproteins (RNPs) that consist of a catalytic RNA and a varying number of protein cofactors. RNase P is responsible for precursor tRNA maturation in all three domains of life, while RNase MRP, exclusive to eukaryotes, primarily functions in rRNA biogenesis. While eukaryotic RNase P is associated with more protein cofactors and has an RNA subunit with fewer auxiliary structural elements compared to its bacterial cousin, the double-anchor precursor tRNA recognition mechanism has remarkably been preserved during evolution.
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