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Analysis of geospatial data has traditionally been model-based, with a mean model, customarily specified as a linear regression on the covariates, and a Gaussian process covariance model, encoding the spatial dependence. While nonlinear machine learning algorithms like neural networks are increasingly being used for spatial analysis, current approaches depart from the model-based setup and cannot explicitly incorporate spatial covariance. We propose , embedding neural networks directly within the traditional Gaussian process (GP) geostatistical model to accommodate non-linear mean functions while retaining all other advantages of GP, like explicit modeling of the spatial covariance and predicting at new locations via kriging. In NN-GLS, estimation of the neural network parameters for the non-linear mean of the Gaussian Process explicitly accounts for the spatial covariance through use of the generalized least squares (GLS) loss, thus extending the linear case. We show that NN-GLS admits a representation as a special type of graph neural network (GNN). This connection facilitates the use of standard neural network computational techniques for irregular geospatial data, enabling novel and scalable mini-batching, backpropagation, and kriging schemes. We provide methodology to obtain uncertainty bounds for estimation and predictions from NN-GLS. Theoretically, we show that NN-GLS will be consistent for irregularly observed spatially correlated data processes. We also provide a finite sample concentration rate, which quantifies the need to accurately model the spatial covariance in neural networks for dependent data. To our knowledge, these are the first large-sample results for any neural network algorithm for irregular spatial data. We demonstrate the methodology through numerous simulations and an application to air pollution modeling. We develop a software implementation of NN-GLS in the Python package geospaNN.
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http://dx.doi.org/10.1080/01621459.2024.2356293 | DOI Listing |
BMC Oral Health
September 2025
Oral and Maxillofacial Radiology Department, Cairo university, Cairo, Egypt.
Aim: The purpose of this study was to assess the accuracy of a customized deep learning model based on CNN and U-Net for detecting and segmenting the second mesiobuccal canal (MB2) of maxillary first molar teeth on cone beam computed tomography (CBCT) scans.
Methodology: CBCT scans of 37 patients were imported into 3D slicer software to crop and segment the canals of the mesiobuccal (MB) root of the maxillary first molar. The annotated data were divided into two groups: 80% for training and validation and 20% for testing.
BMC Psychiatry
September 2025
Department of Cognitive Neuroscience, Faculty of Biology, Bielefeld University, Bielefeld, Germany.
Obsessive-compulsive disorder (OCD) is a chronic and disabling condition affecting approximately 3.5% of the global population, with diagnosis on average delayed by 7.1 years or often confounded with other psychiatric disorders.
View Article and Find Full Text PDFBMC Musculoskelet Disord
September 2025
Department of Clinical Sciences at Danderyds Hospital, Department of Orthopedic Surgery, Karolinska Institutet, Stockholm, 182 88, Sweden.
Background: This study evaluates the accuracy of an Artificial Intelligence (AI) system, specifically a convolutional neural network (CNN), in classifying elbow fractures using the detailed 2018 AO/OTA fracture classification system.
Methods: A retrospective analysis of 5,367 radiograph exams visualizing the elbow from adult patients (2002-2016) was conducted using a deep neural network. Radiographs were manually categorized according to the 2018 AO/OTA system by orthopedic surgeons.
J Cancer Res Clin Oncol
September 2025
Department of Surgery, Mannheim School of Medicine, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany.
Purpose: The study aims to compare the treatment recommendations generated by four leading large language models (LLMs) with those from 21 sarcoma centers' multidisciplinary tumor boards (MTBs) of the sarcoma ring trial in managing complex soft tissue sarcoma (STS) cases.
Methods: We simulated STS-MTBs using four LLMs-Llama 3.2-vison: 90b, Claude 3.
Mol Psychiatry
September 2025
Department of Pharmacological and Biomolecular Sciences "Rodolfo Paoletti", Università degli Studi di Milano, Milan, Italy.
Early-life experiences shape neural networks, with heightened plasticity during the so-called "sensitive periods" (SP). SP are regulated by the maturation of GABAergic parvalbumin-positive (PV+) interneurons, which become enwrapped by perineuronal nets (PNNs) over time, modulating SP closure. Additionally, the opening and closing of SP are orchestrated by two distinct gene clusters known as "trigger" and "brake".
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