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Background/objectives: The BZR gene family, a critical transcription factor in the brassinosteroid (BR) signaling pathway, regulates plant growth and development. Despite its significance, the BZR gene family in , a valuable forage grass renowned for its stress tolerance and nutritional quality, remains uncharacterized, and its functional roles are largely unexplored.
Methods: Employing advanced bioinformatics tools, we conducted a genome-wide survey to identify members of the BZR gene family in . Phylogenetic analyses were performed to classify these genes into distinct clades, while gene structure and conserved motif analyses assessed their evolutionary conservation and potential regulatory mechanisms. Additionally, transcriptome sequencing was utilized to examine the expression patterns of BZR genes in response to simulated animal grazing.
Results: Eight genes were identified, evenly distributed across all seven chromosomes. Phylogenetic analysis categorized these genes into three distinct groups, reflecting their evolutionary relationships. Most genes exhibited highly conserved gene structures and motifs, with promoters enriched in -acting elements such as G-box and ARE. Expression profiling revealed that genes are predominantly expressed in key tissues, particularly leaves and roots, suggesting their involvement in critical physiological processes. Transcriptomic analysis demonstrated that simulated animal grazing modulated the expression levels of genes, implicating their role in promoting cellular elongation and division through the BR signaling pathway.
Conclusions: This study highlights the crucial role of genes in regulating plant growth, development, and response to environmental stimuli, providing a foundational basis for understanding the molecular mechanisms of BR-mediated plant development and stress adaptation.
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http://dx.doi.org/10.3390/genes16020155 | DOI Listing |
Genes Brain Behav
October 2025
Department of Pharmaceutical Sciences, College of Pharmacy, University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.
Major depressive disorder is a prevalent and debilitating psychiatric illness that produces significant disability. Clinical data suggest that the pathophysiology of depression is due, in part, to a dysregulation of inflammation and glutamate levels in the brain. The systemic administration of lipopolysaccharide (LPS) has been shown to induce depressive-like behaviors in mice.
View Article and Find Full Text PDFHGG Adv
September 2025
Department of Medicine IV, Faculty of Medicine, Medical Center-University of Freiburg, University of Freiburg, Freiburg, Germany; Medizinische Genetik Mainz, Limbach Genetics, Mainz, Germany. Electronic address:
Cystic kidney disease and related ciliopathies are caused by pathogenic variants in genes that commonly result in ciliary dysfunction. For a substantial number of individuals affected by those cilia-related diseases, the causative gene still remains unknown. Using massively parallel sequencing, we here identified a pathogenic bi-allelic variant in the gene encoding PALS1-Associated Tight Junction Protein (PATJ; also known as Inactivation-No-Afterpotential D-Like, INADL) in an individual with ciliopathy.
View Article and Find Full Text PDFActa Neuropathol Commun
September 2025
Department of Biomedical and Clinical Sciences and Department of Clinical Pathology, Linköping University, 58185, Linköping, Sweden.
Disruptions in synaptic transmission and plasticity are early hallmarks of Alzheimer's disease (AD). Endosomal trafficking, mediated by the retromer complex, is essential for intracellular protein sorting, including the regulation of amyloid precursor protein (APP) processing. The VPS35 subunit, a key cargo-recognition component of the retromer, has been implicated in neurodegenerative diseases, with mutations such as L625P linked to early-onset AD.
View Article and Find Full Text PDFExp Appl Acarol
September 2025
Institute of Pathogens and Vectors, Yunnan Provincial Key Laboratory for Zoonosis Control and Prevention, Dali University, 22 Wanhua St, Dali, 671000, China.
The family Spinturnicidae belongs to the suborder Monogynapsida, superfamily Dermanyssoidea, and exclusively parasitizes the body surface of bats. In the present study, we determined the complete mitochondrial genome of Spinturnix psi, a species of bat mite, and subsequently conducted a comprehensive analysis of its genomic information. The mitochondrial genome of S.
View Article and Find Full Text PDFMol Syst Biol
September 2025
Department of Medicine, Division of Cardiovascular Medicine, Stanford University, Stanford, CA, USA.
Vascular sites have distinct susceptibility to atherosclerosis and aneurysm, yet the epigenomic and transcriptomic underpinning of vascular site-specific disease risk is largely unknown. Here, we performed single-cell chromatin accessibility (scATACseq) and gene expression profiling (scRNAseq) of mouse vascular tissue from three vascular sites. Through interrogation of epigenomic enhancers and gene regulatory networks, we discovered key regulatory enhancers to not only be cell type, but vascular site-specific.
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