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Cortical parcellation delineates the cerebral cortex into distinct regions according to their distinctiveness in anatomy and/or function, which is a fundamental preprocess in brain cortex analysis and can influence the accuracy and specificity of subsequent neuroscientific research and clinical diagnosis. Conventional methods for cortical parcellation involve spherical mapping and multiple morphological feature computation, which are time-consuming and prone to error due to the spherical mapping process. Recent geometric learning approaches have attempted to automate this process by replacing the registration-based parcellation with deep learning-based methods. However, they have not fully addressed spherical mapping and cortical features quantification, making them sensitive to variations in mesh structures. In this work, to directly parcellate original surfaces in individual space with minimal preprocessing, we present a full-band spectral-accelerated spatial diffusion strategy for stable information propagation on highly folded cortical surfaces, contributing to adaptive learning of fine-grained geometric representations and the construction of a compact deep network (termed Cortex-Diffusion) for fully automatic parcellation. Using only raw 3D vertex coordinates and having merely 0.49 MB of learnable parameters, it demonstrates state-of-the-art parcellation accuracy, efficiency, and superior robustness to mesh resolutions and discretization patterns in both the cases of infant and adult brain imaging datasets.
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http://dx.doi.org/10.1016/j.media.2025.103492 | DOI Listing |
Dev Cogn Neurosci
August 2025
Université Paris Cité, Inserm, NeuroDiderot, Paris F-75019, France; Université Paris-Saclay, CEA, NeuroSpin, UNIACT, Gif-sur-Yvette F-91191, France.
The sensorimotor system develops early in utero and supports the emergence of body representations critical for perception, action, and interaction with environment. While somatotopic protomaps are already developed in the primary somatosensory and motor cortices in late pregnancy, little is known about the anatomical substrates of this functional specialization. In this study, we aimed to decipher the microstructural properties of these regions in the developing brain.
View Article and Find Full Text PDFMach Learn Med Imaging
October 2024
Martinos Center for Biomedical Imaging, MGH & Harvard Medical School.
Parcellation of mesh models for cortical analysis is a central problem in neuroimaging. Most classical and deep learning methods have requisites in terms of mesh topology, requiring inputs that are homeomorphic to a sphere (i.e.
View Article and Find Full Text PDFFamily history is one the most powerful risk factor for attention-deficit/hyperactivity disorder (ADHD), yet no study has tested whether multimodal Magnetic Resonance Imaging (MRI) combined with deep learning can separate familial ADHD (ADHD-F) and non-familial ADHD (ADHD-NF). T1-weighted and diffusion-weighted MRI data from 438 children (129 ADHD-F, 159 ADHD-NF, and 150 controls) were parcellated into 425 cortical and white-matter metrics. Our pipeline combined three feature-selection steps (t-test filtering, mutual-information ranking, and Lasso) with an auto-encoder and applied the binary-hypothesis strategy throughout; each held-out subject was assigned both possible labels in turn and evaluated under leave-one-out testing nested within five-fold cross-validation.
View Article and Find Full Text PDFJ Neural Eng
September 2025
School of Biomedical Engineering, Southern Medical University, Guangzhou 510515, People's Republic of China.
. Conventional functional connectivity (FC) analysis of wide-field calcium imaging (WFCI) data relies on the assumption of homogeneity within predefined anatomical functional areas (FAs), where the signal averaged within each FA serves as the foundation for inter-FA connectivity modeling. However, accumulating evidence suggested significant intra-FA functional heterogeneity with functionally distinct subregions.
View Article and Find Full Text PDFJ Neurosci Methods
August 2025
Department of Radiology, Feinberg School of Medicine, Northwestern University, 737 N. Michigan Ave., Suite 1600, Chicago, IL 60611, United States; Department of Biomedical Engineering, Northwestern University, 2145 Sheridan Road, E310, Evanston, IL 60208, United States.
Background: Functional infrared thermography is a noncontact approach for intraoperative functional mapping which leverages neurovascular coupling-driven heating of activated cortical areas. Conventional analysis of thermography data relies on demonstrating changes in absolute temperature, which can be an inconsistent marker of brain activity.
New Method: This work compares analyzing thermography data through the time derivative of temperature (heat flow) instead of absolute temperature (local heating).