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In recent decades, global change and local anthropogenic pressures have severely affected natural ecosystems and their biodiversity. Although disentangling the effects of these factors is difficult, they are reflected in changes in the functional composition of plant communities. We present a comprehensive, large-scale analysis of long-term changes in plant communities of various non-forest habitat types in the Czech Republic based on 1154 vegetation-plot time series from 53 resurvey studies comprising 3909 vegetation-plot records. We focused not only on taxonomic diversity but also on the functional characteristics of communities. Species richness of most habitat types increased over time, and taxonomic and functional community composition shifted significantly. Habitat specialists and threatened species became less represented in plant communities, indicating a decline in habitat quality. The spread of trees, shrubs, tall herbaceous plants, strong competitors, and nutrient-demanding species in all non-forest habitats, coupled with the decline of light-demanding species, suggests an effect of eutrophication and natural succession following the abandonment of traditional management. Moreover, we identified specific trends in certain habitats. In wetlands, springs, and mires, moisture-demanding species decreased, probably due to drainage, river regulations, and increasing drought resulting from climate change. Dry grasslands, ruderal, weed, sand, and shallow-soil vegetation became more mesic, and successional processes were most pronounced in these communities, suggesting a stronger effect of abandonment of traditional management and eutrophication. In alpine and subalpine vegetation, meadows and mesic pastures, and heathlands, insect-pollinated species declined, and the proportion of grasses increased. Overall, these functional changes provide deep insights into the underlying drivers and help conservationists take appropriate countermeasures.
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http://dx.doi.org/10.1111/gcb.70030 | DOI Listing |
Genome Biol
September 2025
Department of Biology, Plant-Microbe Interactions, Science for Life, Utrecht University, Utrecht, 3584CH, The Netherlands.
Background: Plant roots release root exudates to attract microbes that form root communities, which in turn promote plant health and growth. Root community assembly arises from millions of interactions between microbes and the plant, leading to robust and stable microbial networks. To manage the complexity of natural root microbiomes for research purposes, scientists have developed reductionist approaches using synthetic microbial inocula (SynComs).
View Article and Find Full Text PDFBMC Ecol Evol
September 2025
Laboratory of Biotechnology, Conservation and Valorization of Natural Resources, Faculty of Sciences Dhar El Mahraz, University of Sidi Mohammed Ben Abdellah, P.O. Box 1796 (Atlas), Fez, 30000, Morocco.
NPJ Antimicrob Resist
September 2025
Antimicrobial Resistance & Microbiome Research Group, Department of Biology, The Kathleen Lonsdale Institute for Human Health Research, Maynooth University, Maynooth, Co, Kildare, Ireland.
Plasmids facilitate antimicrobial resistance (AMR) gene spread via horizontal gene transfer, yet the mobility of genes in wastewater treatment plant (WWTP) resistomes remains unclear. We sequenced 173 circularised plasmids transferred from WWTP effluent into Escherichia coli and characterised their genetic content. Multiple multidrug-resistant plasmids were identified, with a significant number of mega-plasmids (>100 kb).
View Article and Find Full Text PDFJ Fish Biol
September 2025
Department of Fisheries and Aquatic Sciences, Cross River University of Technology, PMB 102 Obubra Campus, Calabar, Nigeria.
Floodplains support a diverse cichlid community, yet the trophic ecology of these species is not well understood. This study investigated the dietary niches and trophic guilds of cichlid species in the Cross River floodplain. A total of 480 fish samples from eight cichlid species were collected from three locations (Itu, Obubra, Ikom) over 6 months (October 2019-March 2020).
View Article and Find Full Text PDFEnviron Res
September 2025
National Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, National Engineering Research Center of Microbial Pesticides, Huazhong Agricultural University, Wuhan 430070, PR China; Hubei Hongshan Laboratory, Wuhan 430070, Hubei, China. Electronic address: cmm114@mail
Black soldier fly (BSF) organic fertilizer is known to enhance soil fertility and promote plant growth. However, its effects on soil carbon (C) and nitrogen (N) cycling remains unclear. In this study, we established a BSF chicken manure bioconversion system to produce BSF organic fertilizer and investigate its impacts on soil C and N cycling, as well as microbial ecological networks through metagenomic analysis.
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