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The NPR proteins function as salicylic acid (SA) receptors in Arabidopsis thaliana. AtNPR1 plays a central role in SA-induced transcriptional reprogramming whereby positively regulates SA-mediated defense. NPRs are found in the genomes of nearly all land plants. However, we know little about the molecular functions and physiological roles of NPRs in most plant species. We conducted phylogenetic and alignment analyses of NPRs from 68 species covering the significant lineages of land plants. To investigate NPR functions in bryophyte lineages, we generated and characterized NPR loss-of-function mutants in the liverwort Marchantia polymorpha. Brassicaceae NPR1-like proteins have characteristically gained or lost functional residues identified in AtNPRs, pointing to the possibility of a unique evolutionary trajectory for the Brassicaceae NPR1-like proteins. We find that the only NPR in M. polymorpha, MpNPR, is not the master regulator of SA-induced transcriptional reprogramming and negatively regulates bacterial resistance in this species. The Mpnpr transcriptome suggested roles of MpNPR in heat and far-red light responses. We identify both Mpnpr and Atnpr1-1 display enhanced thermomorphogenesis. Interspecies complementation analysis indicated that the molecular properties of AtNPR1 and MpNPR are partially conserved. We further show that MpNPR has SA-binding activity. NPRs and NPR-associated pathways have evolved distinctively in diverged land plant lineages to cope with different terrestrial environments.
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http://dx.doi.org/10.1111/nph.19981 | DOI Listing |
Plant Commun
September 2025
College of Horticulture, Bioinformatics Center, Academy for Advanced Interdisciplinary Studies, Nanjing Agricultural University, Nanjing 210095, China. Electronic address:
Molecular phylogenetics illustrates the evolution and divergence of green plants by employing sequence data from various sources. Interestingly, phylogenetic reconstruction based on mitochondrial genes tends to exhibit incongruence with those derived from nuclear and chloroplast genes. Although the uniparental inheritance and conservatively retained protein-coding genes of mitochondrial genomes inherently exclude certain potential factors that affect phylogenetic reconstruction, such as hybridization and gene loss, the utilization of mitochondrial genomes for phylogeny and divergence time estimation remains limited.
View Article and Find Full Text PDFGlob Chang Biol
September 2025
Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Plants play a key role in mediating soil response to global change, and breeding or engineering crops to increase soil organic carbon (SOC) storage is a potential route to land-based carbon dioxide removal in agricultural systems. However, due to limited observational datasets plus shifting paradigms of SOC stabilization, it is unclear which plant traits are most important for enhancing different types of soil organic matter. Existing long-term common gardens of genetically diverse plant populations may provide an opportunity to evaluate biological controls on SOC, separate from environmental or management variability.
View Article and Find Full Text PDFPhysiol Plant
August 2025
Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, College of Life Sciences, College of Plant Protection, School of Future Technology, Haixia Institute of Science and Technology, Fujian Agriculture an
The cell cycle is a fundamental process of plant growth, development, and reproduction, in which cyclin-dependent kinases (CDKs) and cyclins (CYCs) play central roles in regulating the progression through various stages. These proteins are coordinated with multiple interacting partners to ensure the accurate execution of essential biological events such as DNA replication, chromosome segregation, and cell division. Marchantia polymorpha, one of the earliest diverging land plant species, has emerged as a key model for exploring fundamental mechanisms in plant biology and evolution.
View Article and Find Full Text PDFJ Environ Manage
August 2025
Department of Environment and Geography, University of York, York, UK; York Environmental Sustainability Institute, University of York, York, UK.
The delineation of conservation priority areas may involve both trade-offs and synergies with sustainable development goals, but region-specific and integrative assessments that simultaneously consider habitat, biodiversity, ecosystem services, and human well-being remain limited in high-altitude regions such as the Qinghai-Tibet Plateau. Taking habitat, biodiversity, ecosystem services and human well-being as management objectives, this paper focuses on the Qinghai-Tibet Plateau (QTP) and develops an indicator system that integrates these considerations. The paper: a) uses the zonation model to identify conservation priority areas under both single-objective and multi-objective conditions, b) evaluates the conservation gaps in existing protected areas and c) assesses the synergies and trade-offs among the different objectives by employing various scenarios.
View Article and Find Full Text PDFThe green sea turtle is a wide-ranging marine reptile, inhabiting all the world's tropical and warm-temperate seas. This global distribution makes delineating population boundaries challenging, and molecular tools like genetic markers are often required to define these limits. The Red Sea hosts ~1500 nesting green turtles, but research in the region is limited.
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