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An unprecedented and efficient three-component 1,3-dipolar cycloaddition reaction using (2-(benzo[d]thiazol-2-yl)-3-(aryl)acrylonitriles - and an in situ generated azomethine ylide from isatin and -methylglycine is described. The reaction exhibits exclusive regioselectivity, resulting in the formation of 3'-(benzo[]thiazol-2-yl)-1'-methyl-2-oxo-4'-(aryl)spiro[indoline-3,2'-pyrrolidine]-3'-carbonitriles regioisomers through / approaches. The diastereoselectivity of the reaction is highly dependent on the substitution pattern of the phenyl ring in dipolarophiles -, leading to the formation of /-cycloadducts in varying ratios. To understand the stereoselectivity, the transition state structures were optimized using the TS guess geometry with the QST3-based method. The reaction mechanism and regioselectivity were elucidated by evaluating global and local electrophilicity and nucleophilicity descriptors at the B3LYP/cc-pVTZ level of theory, along with considerations based on the HSAB principle. The analysis of global electron density transfer (GEDT) showed that the reactions are polar and electron density fluxes from azomethine ylide toward dipolarophile -. It was found from the molecular electrostatic potential map (MESP) that at the more favorable transition state, approach of reactants locates the oppositely charged regions over each other resulting in attractive forces between the two fragments. The computational results are consistent with the experimental observations, confirming that the reactions proceed through an asynchronous one-step mechanism.
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http://dx.doi.org/10.1021/acsomega.4c01552 | DOI Listing |
RSC Adv
August 2025
Laboratory of Applied Physics, Department of Physics, Faculty of Sciences of Sfax, University of Sfax Sfax Tunisia.
The mechanistic pathway of the (3 + 2) cycloaddition (32CA) between azomethine ylide 1 and dimethyl acetylenedicarboxylate 2, affording 4-isoxazoline derivatives, was elucidated Density Functional Theory (DFT) calculations employing the B3LYP-D3 functional and the 6-311++G(d,p) basis set in 1,4-dioxane. Reactivity insights derived from Conceptual DFT (CDFT) demonstrated that compound 1 behaves as an ambiphilic species with significant nucleophilic and electrophilic tendencies, whereas compound 2 functions predominantly as an electrophile. These electronic features reveal a marked polarity in the cycloaddition and align with a forward electron density flux (FEDF) governing the reaction process.
View Article and Find Full Text PDFOrg Lett
August 2025
Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, Innovative Drug Research Center, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, China.
Pyrrolidines are privileged scaffolds commonly found in natural products, endowed with distinctive biological activities and significant pharmaceutical relevance. Herein, we describe a robust, DNA-compatible strategy for the efficient synthesis of pyrrolidine-fused scaffolds via a three-component cycloaddition of azomethine ylides. The resulting scaffolds, bearing reactive N-termini, can be further diversified using a range of reagents, thereby enhancing the chemical diversity of drug-like pyrrolidine-fused DNA-encoded library (DEL).
View Article and Find Full Text PDFOrg Biomol Chem
July 2025
Department of Chemistry, College of Engineering and Technology, SRM Institute of Science and Technology, Kattankulathur, 603 203 Chennai, Tamil Nadu, India.
Regioselective (3 + 2) cycloaddition reactions of zerumbone with nitrile oxides and azomethine ylides are developed for the first time. Direct functionalization of the C10-C11 double bond in zerumbone is unique. ZI-8, ZI-9, and ZI-10 exhibited substrate-driven dimer formation, whereas ZI-9 and ZI-10 exhibited solid-state conformational variability.
View Article and Find Full Text PDFOrg Biomol Chem
July 2025
LAQV-REQUIMTE, Instituto de Ciências Biomédicas Abel Salazar da Universidade do Porto, Rua de Jorge Viterbo Ferreira, 228, 4050-313 Porto, Portugal.
Two novel sulphur-containing pyrrolidine-fused chlorin derivatives, Chlor-SH_trans and Chlor-CSH_trans, were synthesized through a 1,3-dipolar cycloaddition reaction of -tetrakis(pentafluorophenyl)porphyrin with azomethine ylides generated through the condensation of paraformaldehyde with cysteine or L-thiazolidine-4-carboxylic acid (for Chlor-SH_trans) and homocysteine (for Chlor-CSH_trans). The synthesized chlorins were structurally characterized using various techniques, including nuclear magnetic resonance, UV-vis absorption and fluorescence spectroscopy and mass spectrometry. Density functional theory calculations confirmed that the isomer is the most stable for both chlorins, corroborating nuclear magnetic resonance findings.
View Article and Find Full Text PDFOrg Lett
July 2025
Laboratoire de Méthodologie et Synthèse de Produits Naturels, Université du Québec à Montréal, C.P. 8888, Succ. Centre-Ville, Montréal H3C 3P8, Québec, Canada.
We describe a concise enantioselective synthesis of (-)-gracilamine from -nosyl-tyrosine methyl ester in 10 steps. A tyrosine-derived oxazolidine functions as both a protecting group and a chiral auxiliary to guide an early oxidative dearomatization process that establishes a crucial quaternary carbon and the desymmetrization of a prochiral dienone. The synthesis is completed by a cascade involving a Fukuyama nosyl deprotection/1,4-addition, an azomethine ylide cycloaddition, an oxidative fragmentation, and a double reductive amination.
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