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Modified hydrochar (NHC@Fe), with multiple functional groups and transition metal oxide-containing surface, was successfully synthesized by one-step hydrothermal method. The differences in its catalytic activity for peroxymonosulfate (PMS) and peroxydisulfate (PDS) activation were studied in detail. Experimental and DFT studies showed that abundant active sites, namely, transition metals and functional groups on NHC@Fe provided multiple effective pathways for the activation of persulfate (PS). The NHC@Fe/PMS and NHC@Fe/PDS systems could degrade about 80% of tetracycline hydrochloride (TC) in 120 min and were found to be better than those modified by iron or nitrogen alone. This emphasized the advantage of N-Fe co-modification in persulfate activation. Although the Fe/Fe cycle accelerated the activation, the activation of PMS mainly relied on Fe, whereas that of PDS mainly relied on Fe. Moreover, Fe-N, pyrrolic N, pyridine N, C-O, and O-CO groups also played a key role in the activation process, but the dominant action sites were not the same. Multiple free radicals, such as SO, OH, O, and O were generated in PMS and PDS activation systems. O induced non-free radical pathway was mainly involved in the degradation of TC in both activation systems, but the generation pathway of O was more direct and rapid in the PDS system. This study provides detailed DFT models of the active sites activated by PMS and PDS and discusses the activation pathways of PMS and PDS along with the similarities and differences in ROS reaction mechanisms.
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http://dx.doi.org/10.1016/j.envpol.2023.122981 | DOI Listing |
Nanoscale Horiz
September 2025
Department of Physical Chemistry, São Carlos Institute of Chemistry, University of São Paulo, Brazil.
This study developed heterogeneous catalysts composed of ZnO and CeO supported on H-ZSM-5 for the direct conversion of methane (CH) and carbon dioxide (CO) into acetic acid. The acid-base and electronic properties were modulated through oxide impregnation and reduction, aiming to create active sites capable of simultaneously activating both reactants. The samples were characterized by XRD, N physisorption, HRTEM/EDS, NH-TPD, CO-TPD, TPR, FTIR, XPS, CO-DRIFTS, and TGA, and tested in a batch reactor at 300 °C and 10 bar.
View Article and Find Full Text PDFMol Inform
September 2025
Department of Computational Chemistry, "Coriolan Drăgulescu" Institute of Chemistry Timișoara, Romanian Academy, Timișoara, Romania.
Docking is a structure-based cheminformatics tool broadly employed in early drug discovery. Based on the tridimensional structure of the protein target, docking is used to predict the binding interactions between the protein and a ligand, estimate the corresponding binding affinity, or perform virtual screenings (VSs) to identify new active compounds. This study introduces the ligand B-factor index (LBI), a novel computational metric for prioritizing protein-ligand complexes for docking.
View Article and Find Full Text PDFJ Chem Inf Model
September 2025
School of Medicine and Warshel Institute for Computational Biology, The Chinese University of Hong Kong─Shenzhen, Shenzhen, Guangdong 518172, China.
Argonaute (Ago) is a DNA-guided programmable endonuclease with emerging applications in genome engineering, yet the rate-determining dynamic mechanisms governing its transition from guide-target hybridization to catalytic activation remain unresolved. Here, we employ molecular dynamics simulations and the Traveling-salesman-based Automated Path Searching (TAPS) approach to dissect the target DNA recognition in the middle region (nt 9-12) of Ago. We designed two paths to tackle this problem: one assumed that coordination of the target DNA backbone occurs before base-pairing between the target and guide DNA; the other hypothesized a concerted transition without preferred order between backbone-coordination and base-pairing.
View Article and Find Full Text PDFUrol Oncol
September 2025
Nutritional, Genes and Human Disease Laboratory, Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka, Bangladesh. Electronic address:
Background: Understanding the mutational landscape is critical for elucidating the molecular mechanisms driving cancer progression. This study aimed to profile somatic mutations in bladder cancer patients (N=7) from Bangladesh to provide insights into the genetic alterations underlying this malignancy.
Methods: We performed targeted sequencing of 50 oncogenes and tumor suppressor genes using the Ion AmpliSeq Cancer Hotspot Panel v2 on tumor and matched blood samples from seven bladder cancer patients.
Environ Res
September 2025
Center for High Technology Development, Nguyen Tat Thanh University, Ho Chi Minh City Hi-Tech Park, Ho Chi Minh City, Vietnam; Institute of Applied Technology and Sustainable Development, Nguyen Tat Thanh University, Ho Chi Minh City, Vietnam. Electronic address:
The development of novel multijunction heterostructure photocatalysts is critical for the efficient degradation of organic pollutants, attributed to their ability to enhance the separation of photogenerated electron-hole pairs. In our study, a ternary composite, melem/BiVO/g-CN (BVO/CNMH), was synthesized via an acid-soaking method followed by calcination, using g-CN as a sacrificial precursor in the presence of BiVO. This approach yielded a porous, interconnected architecture in BVO/CNMH.
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