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Background: The association between Killer cell lectin like receptor B1 (KLRB1) and cancer has been reported, but the roles of KLRB1 in breast invasive carcinoma (BRCA) has not been fully revealed.
Methods: Our study utilized the Cancer Genome Atlas (TCGA), Kaplan-Meier (K-M) Plotter, and TIMER databases to investigate the expression and clinical relevance of KLRB1 in BRCA and to explore its roles and mechanism in BRCA progression using gene set enrichment analysis, CCK-8, migration, apoptosis, and western blotting. We examined the relationship between KLRB1 expression and the BRCA immune microenvironment, using data from TCGA, and Gene Expression Profiling Interactive Analysis (GEPIA) databases and validated these findings in K-M Plotter databases.
Results: A significant decrease of KLRB1 expression was observed in BRCA patients. BRCA patients with low KLRB1 levels were associated with older age, advanced disease stage, HER2-positivity, poor prognosis, and a decreased survival probability compared to the high-expression group. Increased KLRB1 expression levels were correlated with inhibition of breast cancer cell proliferation, migration, and invasion, as well as promotion of cell apoptosis, possible through regulation of the NF-κB, PI3K/AKT, and TNF signaling pathways. Moreover, the study also indicated that decreased KLRB1 expression correlated with tumor purity, immune score, and immune cell infiltration (B cells, CD8 T cells, CD4 T cells, neutrophils, dendritic cells, among others), cell markers, and immunotherapy.
Conclusion: Decreased KLRB1 expression in BRCA is associated with poor prognosis and immune microenvironment. This study also highlights KLRB1 as a potential molecular marker for poor prognosis in BRCA patients, and therefore, it may provide clinical implications for the management of patients with BRCA.
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http://dx.doi.org/10.18632/aging.205239 | DOI Listing |
Front Immunol
September 2025
Department of Ophthalmology, The Second Hospital of Jilin University, Changchun, China.
Human C-type lectin-like molecule CD161 is a type II transmembrane protein expressed on the surface of various lymphocytes within both the innate and adaptive immune systems. CD161 serves as a marker for innate-like T cells and IL-17-producing cells. However, the meaning of these T cells expressing CD161 has not yet been fully determined.
View Article and Find Full Text PDFCancer Med
September 2025
Dongguan Tungwah Hospital, Dongguan, Guangdong Province, China.
Background: Colorectal cancer (CRC) remains a major challenge in oncology, necessitating the identification of new therapeutic targets. This study aimed to explore the CRC microenvironment and uncover potential targets using single-cell RNA sequencing (scRNA-seq).
Methods: Single-cell RNA sequencing data from GEO (GSE164522, GSE132465, and GSE144735) were integrated and stratified based on CRC clinical stages and tumor grades.
Nucleosides Nucleotides Nucleic Acids
August 2025
Dongguan Hospital of Guangzhou University of Chinese Medicine (Dongguan Traditional Chinese Medicine Hospital), Dongguan, Guangdong Province, People's Republic of China.
In the present study, we investigated the relationship between rheumatoid arthritis (RA) and knee osteoarthritis (OA) using bioinformatics, aiming to identify the differentially expressed genes (DEGs) of RA and explore the possible mechanism of RA. The GSE55584 and GSE153015 microarray datasets for RA and OA gene expression profiles were acquired from the Gene Expression Omnibus (GEO) database. The DEGs of the two datasets were obtained by R language processing and analysis.
View Article and Find Full Text PDFDiabetes
August 2025
Institute of Genetics and Cancer, College of Medicine and Veterinary Medicine, University of Edinburgh, Edinburgh, U.K.
Unlabelled: The "omnigenic" hypothesis postulates that polygenic effects of common variants on typical complex traits coalesce via trans effects on the expression of a relatively sparse set of "core" effector genes and their encoded proteins in relevant tissues. The objective of this study was to identify core proteins for type 1 diabetes. We used summary statistics for single nucleotide polymorphism associations with plasma levels of 5,130 proteins in three large cohorts, including the UK Biobank, to compute genome-wide aggregated trans effects (GATE) scores for protein levels in two type 1 diabetes case-control studies (6,828 case individuals, 416,000 control individuals).
View Article and Find Full Text PDFRes Sq
July 2025
Department of Pediatrics, University of Mississippi Medical Center, Jackson, Mississippi.
Background: We aim to determine the gene expression changes that occur in surgical NEC infants with and without moderate to severe necrosis and survivors and non-survivors.
Methods: Targeted RNA sequencing was performed on RNA isolated from formalin-fixed, paraffin-embedded (FFPE) intestinal tissue samples (N=36). DeSeq2 was used to analyze differential expressions between infants with mild to moderate and severe necrosis and with respect to survival status.