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In the fungus , carotenoid production is up-regulated by light and down-regulated by the CarS RING finger protein, which modulates the mRNA levels of carotenoid pathway genes ( genes). To identify new potential regulators of genes, we used a biotin-mediated pull-down procedure to detect proteins capable of binding to their promoters. We focused our attention on one of the proteins found in the screening, belonging to the High-Mobility Group (HMG) family that was named HmbC. The deletion of the gene resulted in increased carotenoid production due to higher mRNA levels of biosynthetic genes. In addition, the deletion resulted in reduced mRNA levels, which could also explain the partial deregulation of the carotenoid pathway. The mutants exhibited other phenotypic traits, such as alterations in development under certain stress conditions, or reduced sensitivity to cell wall degrading enzymes, revealed by less efficient protoplast formation, indicating that HmbC is also involved in other cellular processes. In conclusion, we identified a protein of the HMG family that participates in the regulation of carotenoid biosynthesis. This is probably achieved through an epigenetic mechanism related to chromatin structure, as is frequent in this class of proteins.
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http://dx.doi.org/10.3390/genes14081661 | DOI Listing |
Bio Protoc
August 2025
Institute of Health Sciences and Technology (IHST), Institutes of Physical Sciences and Information Technology, Anhui University, Hefei, China.
The Sox (SRY-related HMG-box) protein family plays a crucial role in cellular differentiation, development, and gene regulation, with the HMG (high-mobility group) domain responsible for DNA binding and transcriptional regulation. Proteins in the SOX gene family contain an HMG domain that shares 50% homology with the HMG domain of the sex-determining factor SRY gene. The SOX gene family comprises 30 proteins, which are classified into 10 groups (A-H).
View Article and Find Full Text PDFPLoS One
August 2025
College of Forestry Engineering, Shandong Agriculture and Engineering University, Jinan, P R China.
Terpenoids are critical components of plant environmental adaptation mechanisms. They also exhibit significant therapeutic potential in herbal medicine. 3-Hydroxy-3-methylglutaryl coenzyme A reductase (HMGR), a pivotal rate-limiting enzyme governing the initial stage of the mevalonate (MVA) pathway in triterpene saponin biosynthesis, remains uncharacterized in Ziziphus jujuba var.
View Article and Find Full Text PDFmedRxiv
August 2025
Department of Genetic Epidemiology in Psychiatry, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany.
We conducted the largest genome-wide meta-analysis of borderline personality disorder (BPD) to date, with a discovery sample of 12,339 cases and 1,041,717 controls, and a replication study of 685 cases and 107,750 controls (all participants of European ancestry). We identified 11 independent associated genomic loci, and nine risk genes in the gene-based analysis. We observed a single-nucleotide polymorphism (SNP) heritability of 17.
View Article and Find Full Text PDFJ Mol Histol
July 2025
Department of Pathology, Nantong First People's Hospital, No. 666, Shengli Road, Guanyinshan Street, Nantong, 226001, China.
Triple-negative breast cancer (TNBC) is a specific subtype of breast cancer that poses a serious threat to women's health. The aldo-keto reductase type 1 C (AKR1C) family serves as a crucial ferroptosis defense system, catalyzing the conversion of aldehydes and ketones into their corresponding alcohols. SRY-Box4 (SOX4), a transcription factor of the SOX (sry-related HMG-box) family, is important in regulating tumor progression.
View Article and Find Full Text PDFSci Total Environ
August 2025
Department of Marine and Freshwater Resources Management, Faculty of Aquatic Sciences, Istanbul University, Istanbul, Türkiye.
The Mediterranean gorgonian octocorals are threatened by acidification, warming and marine heat waves. Phenotypic plasticity is critical for slow-growing gorgonians, as adaptation through natural selection might not be fast enough to cope with rapid environmental changes. DNA methylation (DNAm) is a type of (trans)generational phenotypic plasticity mechanism that may help slow-growing corals better withstand the effects of environmental changes by adjusting gene expression.
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