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Background: Both autophagy and glycolysis are essential for pancreatic ductal adenocarcinoma (PDAC) survival due to desmoplasia. We investigated whether targeting a hub gene which participates in both processes could be an efficient strategy for PDAC treatment.
Methods: The expression pattern of glycolysis signatures (GS) and autophagy signatures (AS) and their correlation with cystatin B (CSTB) in PDAC were analysed. It was discovered how CSTB affected the growth, glycolysis, and autophagy of PDAC cells. We assessed competitive binding to cathepsin B (CTSB) between CSTB and cystatin C (CSTC) via immunoprecipitation (IP) and immunofluorescence (IF). Chromatin immunoprecipitation quantitative polymerase chain reaction (ChIP-qPCR) and luciferase reporter gene assays were used to unveil the mechanism underlying CSTB upregulation. The expression pattern of CSTB was examined in clinical samples and KrasG12D/+, Trp53R172H/+, Pdx1-Cre (KPC) mice.
Results: GS and AS were enriched and closely associated in PDAC tissues. CSTB increased autophagic flux and provided substrates for glycolysis. CSTB knockdown attenuated the proliferation of PDAC cells and patient-derived xenografts. The liquid chromatography-tandem mass spectrometry assay indicated CSTB interacted with CTSB and contributed to the proteolytic activity of CTSB in lysosomes. IF and IP assays demonstrated that CSTB competed with CSTC to bind to CTSB. Mutation of the key sites of CSTB abolished the interaction between CSTB and CTSB. CSTB was highly expressed in PDAC due to H3K27acetylation and SP1 expression. High expression of CSTB in PDAC was observed in tissue microarray and patients' serum samples.
Conclusions: Our work demonstrated the tumorigenic roles of autophagy and glycolysis in PDAC. CSTB is a key role in orchestrating these processes to ensure energy supply of PDAC cells.
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http://dx.doi.org/10.1002/ctm2.1126 | DOI Listing |
Chemosphere
September 2025
IPREM, IMT Mines Alès, Universite de Pau et des Pays de l'Adour, CNRS, 64000, Pau, France. Electronic address:
Nat Ecol Evol
August 2025
Department of Computational Biology, University of Lausanne, Lausanne, Switzerland.
Ancestral genomes are essential for studying the diversification of life from the last universal common ancestor to modern organisms. Methods have been proposed to infer ancestral gene order, but they lack scalability, limiting the depth to which gene neighbourhood evolution can be traced back. Here we introduce edgeHOG, a tool designed for accurate ancestral gene order inference with linear time complexity.
View Article and Find Full Text PDFSci Rep
August 2025
Department of Obstetrics and Gynecology, First Affiliated Hospital of Guangxi Medical University, Nanning City, 530000, Guangxi Zhuang Autonomous Region, China.
The aberrant expression of RNA binding proteins (RBPs) is linked to various diseases, including cervical squamous cell carcinoma and endocervical adenocarcinoma (CESC). However, the single-cell landscape of RBPs in CESC remains unclear. We analyzed single-cell data from 2 HPV + and 2 HPV- CESC samples to assess cell subtype composition and differential gene expression.
View Article and Find Full Text PDFSci Total Environ
August 2025
Laboratory for the Science of Risks (LSR), IMT Mines Ales, 30100 Ales, France.
The repeated occurrence, intensity and frequency of urban heatwaves pose significant challenges to urban areas. This paper critically reviews the current state of modelling the impact of irrigated vegetation on urban microclimate. It synthesizes findings from recent publications on the subject, focusing on the methodologies, challenges, and advances in numerical models that describe thermal comfort and heat mitigation strategies.
View Article and Find Full Text PDFBladder (San Franc)
March 2025
Department of Urology, School of Medicine, The University of Kansas Medical Center, Kansas 66160, United States of America.
Background: Cystatins, encoded by the gene family, are a superfamily of cysteine protease inhibitors involved in a wide array of biological functions, including immune modulation and antimicrobial defense. Cystatin proteins are implicated in tumor progression through multiple mechanisms. However, their roles in bladder cancer remain poorly understood.
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