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Many leading journals in ecology and evolution now mandate open data upon publication. Yet, there is very little oversight to ensure the completeness and reusability of archived datasets, and we currently have a poor understanding of the factors associated with high-quality data sharing. We assessed 362 open datasets linked to first- or senior-authored papers published by 100 principal investigators (PIs) in the fields of ecology and evolution over a period of 7 years to identify predictors of data completeness and reusability (data archiving quality). Datasets scored low on these metrics: 56.4% were complete and 45.9% were reusable. Data reusability, but not completeness, was slightly higher for more recently archived datasets and PIs with less seniority. Journal open data policy, PI gender and PI corresponding author status were unrelated to data archiving quality. However, PI identity explained a large proportion of the variance in data completeness (27.8%) and reusability (22.0%), indicating consistent inter-individual differences in data sharing practices by PIs across time and contexts. Several PIs consistently shared data of either high or low archiving quality, but most PIs were inconsistent in how well they shared. One explanation for the high intra-individual variation we observed is that PIs often conduct research through students and postdoctoral researchers, who may be responsible for the data collection, curation and archiving. Levels of data literacy vary among trainees and PIs may not regularly perform quality control over archived files. Our findings suggest that research data management training and culture within a PI's group are likely to be more important determinants of data archiving quality than other factors such as a journal's open data policy. Greater incentives and training for individual researchers at all career stages could improve data sharing practices and enhance data transparency and reusability.
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http://dx.doi.org/10.1098/rspb.2021.2780 | DOI Listing |
J Environ Manage
September 2025
Department of Mechanical Engineering, University of Colorado Boulder, 1111 Engineering Drive, Boulder, CO, USA. Electronic address:
This study assesses the performance of the ADMS-Urban dispersion model in estimating 1-h mean nitrogen dioxide (NO) concentrations within the street canyons of Prague. While traditional air quality modeling that relies on sparse data from localized monitoring stations, this approach pioneers the integration of traffic, background, and rooftop sensor network, to archive a more granular validation of model outputs. The results demonstrate robust model performance, with FAC2 values ranging from 0.
View Article and Find Full Text PDFJMIR Form Res
September 2025
Department of Medical Science, Asan Medical Institute of Convergence Science and Technology, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Asan Medical Center, Seoul, 05505, Republic of Korea.
Background: Opportunistic computed tomography (CT) screening for the evaluation of sarcopenia and myosteatosis has been gaining emphasis. A fully automated artificial intelligence (AI)-integrated system for body composition assessment on CT scans is a prerequisite for effective opportunistic screening. However, no study has evaluated the implementation of fully automated AI systems for opportunistic screening in real-world clinical practice for routine health check-ups.
View Article and Find Full Text PDFPLoS One
September 2025
Department of Zoology, University of British Columbia, Vancouver, British Columbia, Canada.
Computer vision has increasingly shown potential to improve data processing efficiency in ecological research. However, training computer vision models requires large amounts of high-quality, annotated training data. This poses a significant challenge for researchers looking to create bespoke computer vision models, as substantial human resources and biological replicates are often needed to adequately train these models.
View Article and Find Full Text PDFAsia Pac J Clin Oncol
September 2025
Mater Hospital Brisbane, Mater Misericordiae Ltd, South Brisbane, Queensland, Australia.
Aims: Castrate-resistant prostate cancer (CRPC) is a common malignancy with poor prognostic outcomes. Breast cancer (BRCA) genes 1 and 2 mutations occur in prostate cancers and confer poorer prognoses. Somatic BRCA testing can lead to inconclusive results, which can gatekeep patients from accessing targeted medications.
View Article and Find Full Text PDFJ Geriatr Cardiol
July 2025
Department of Cardiology, the Sixth Medical Center of PLA General Hospital, Beijing, China.
Background: Medical informatics accumulated vast amounts of data for clinical diagnosis and treatment. However, limited access to follow-up data and the difficulty in integrating data across diverse platforms continue to pose significant barriers to clinical research progress. In response, our research team has embarked on the development of a specialized clinical research database for cardiology, thereby establishing a comprehensive digital platform that facilitates both clinical decision-making and research endeavors.
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