Category Ranking

98%

Total Visits

921

Avg Visit Duration

2 minutes

Citations

20

Article Abstract

Non-alcoholic fatty liver disease (NAFLD) is among the most common liver pathologies, however, none approved condition-specific therapy yet exists. The present study introduces a drug repositioning (DR) approach that combines steatosis models with a network-based computational platform, constructed upon genomic data from diseased liver biopsies and compound-treated cell lines, to propose effectively repositioned therapeutic compounds. The introduced approach screened 20'000 compounds, while complementary and proteomic assays were developed to test the efficacy of the 46 predictions. This approach successfully identified six compounds, including the known anti-steatogenic drugs resveratrol and sirolimus. In short, gallamine triethiotide, diflorasone, fenoterol, and pralidoxime ameliorate steatosis similarly to resveratrol/sirolimus. The implementation holds great potential in reducing screening time in the early drug discovery stages and in delivering promising compounds for testing.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8889147PMC
http://dx.doi.org/10.1016/j.isci.2022.103890DOI Listing

Publication Analysis

Top Keywords

network-based computational
8
non-alcoholic fatty
8
fatty liver
8
liver disease
8
compounds
5
computational experimental
4
experimental framework
4
framework repurposing
4
repurposing compounds
4
compounds treatment
4

Similar Publications

Cerebrovascular Segmentation Network Based on Fast Fourier Convolution and Mamba.

Biomed Phys Eng Express

September 2025

College of Computer Science and Technology, China University of Petroleum East China - Qingdao Campus, College of Computer Science and Technology, China University of Petroleum (East China), Qingdao 266580, China, Qingdao, Shandong, 266580, CHINA.

Purpose: Cerebrovascular segmentation is crucial for the diagnosis and treatment of cerebrovascular diseases. However, accurately extracting cerebral vessels from Time-of-Flight Magnetic Resonance Angiography (TOF-MRA) remains challenging due to the topological complexity and anatomical variability.

Methods: This paper presents a novel Y-shaped segmentation network with fast Fourier convolution and Mamba, termed F-Mamba-YNet.

View Article and Find Full Text PDF

Identifying side effects is crucial for drug development and postmarket surveillance. Several computational methods based on graph neural networks (GNNs) have been developed, leveraging the topological structure and node attributes in graphs with promising results. However, existing heterogeneous-network-based approaches often fail to fully capture the complex structure and rich semantic information within these networks.

View Article and Find Full Text PDF

Genome graphs provide a powerful reference structure for representing genetic diversity. Their structure emphasizes the polymorphic regions in a collection of genomes, enabling network-based comparisons of population-level variation. However, current tools are limited in their ability to quantify and compare structural features across large genome graphs.

View Article and Find Full Text PDF

Motivation: The increasing demand for effective drug combinations has made drug-drug interaction prediction a critical task in modern pharmacology. While most existing research focuses on small-molecule drugs, the role of biotech drugs in complex disease treatments remains relatively unexplored. Biotech drugs, derived from biological sources, have unique molecular structures that differ significantly from those of small molecules, making their interactions more challenging to predict.

View Article and Find Full Text PDF

Many traditional classification networks directly use the limb two-lead signal (MLII) ECG signals as input for training. However, this method suffers from reduced accuracy when ECG features are not obvious, especially for premature heartbeats. To solve the issue, this paper proposed a novel network, namely CDLR-Net, that combines a Deep Residual Shrinkage Network (DRSN) with a Long Short-Term Memory (LSTM).

View Article and Find Full Text PDF