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Article Abstract

The vast majority of described prokaryotic viruses have double-stranded or single-stranded DNA or double-stranded RNA genomes. Until 2020, a mere four prokaryotic single-stranded, positive-sense RNA viruses have been classified in two genera (). Several recent metagenomic and metatranscriptomic studies revealed a vastly greater diversity of these viruses in prokaryotic soil communities than ever anticipated. Phylogenetic analysis of these newly discovered viruses prompted the reorganization of class , now renamed , to include two orders, and , and a total of six families, 428 genera and 882 species. Here we outline the new taxonomy of , approved and ratified in 2021 by the International Committee on Taxonomy of Viruses, and describe open-access hidden Markov models to accommodate the anticipated identification and future classification of hundreds, if not thousands, of additional class members into this new taxonomic framework.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8743537PMC
http://dx.doi.org/10.1099/mgen.0.000686DOI Listing

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