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Simulations based on electronic structure theory naturally include polarization and have no transferability problems. In particular, Kohn-Sham density functional theory (KS-DFT) has become the method of reference for ab initio molecular dynamics simulations of condensed matter systems. However, the high computational cost often poses strict limits on the affordable system size as well as on the extension of sampling (number of configurations). In this work, we propose an improvement to the subsystem density functional theory approach, known as the Kim-Gordon (KG) scheme, thus enabling the sampling of configurations for condensed molecular systems keeping the KS-DFT level accuracy at a fraction of computer time. Our scheme compensates the known KG shortcomings of the electronic kinetic energy term by adding a simple correction and can match KS-DFT accuracy in energies and forces. The computationally cheap correction is determined by means of a machine learning procedure. The proposed KG scheme is applied within a linear scaling self-consistent field formalism and is assessed by a series of molecular dynamics simulations of liquid water under different conditions. Although system-dependent, the correction is transferable between system sizes and temperatures.
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http://dx.doi.org/10.1021/acs.jctc.1c00592 | DOI Listing |
J Cereb Blood Flow Metab
September 2025
Achucarro Basque Center for Neuroscience, Leioa, Spain.
Adenosine A receptors (AARs) have shown promising therapeutic properties despite their controversial role in modulating stroke outcome. However, the temporal evolution of cerebral AARs density after cerebral ischemia and its subsequent neuroinflammatory response have been scarcely explored. In this study, the expression of AARs after transient middle cerebral artery occlusion (MCAO) was evaluated in rats by positron emission tomography (PET) with [C]SCH442416 and immunohistochemistry (IHC).
View Article and Find Full Text PDFInorg Chem
September 2025
Department of Chemistry and Chemical Engineering, Heze University, Heze, Shandong 274015, China.
Transition metal (TM)-doped silicon clusters represent critical model systems for understanding nanoscale hybridization and stability mechanisms. This study provides a comprehensive analysis of structural evolution, electronic properties, and thermodynamic stability in ruthenium-doped silicon clusters (RuSi̅, = 7-11) through integrated experimental and computational approaches. Anion photoelectron spectroscopy combined with density functional theory (DFT/B3LYP), coupled-cluster theory [CCSD(T)], and bonding analyses (AdNDP, NICS, ACID) reveals charge-state-dependent structural transitions, with full Ru encapsulation emerging at = 10 for anions and = 11 for neutrals.
View Article and Find Full Text PDFPhys Chem Chem Phys
September 2025
Department of Physics, Mizoram University, Aizawl-796004, India,.
It is anticipated that wide-bandgap semiconductors (WBGSs) would be useful materials for energy production and storage. A well-synthesized, yet scarcely explored, diamond-like quaternary semiconductor LiZnGeS has been considered for this work. Herein, we have employed two well-known functionals GGA and mGGA within a framework of density functional theory (DFT).
View Article and Find Full Text PDFZhong Nan Da Xue Xue Bao Yi Xue Ban
May 2025
Department of Hepatobiliary and Pancreatic Surgery, Third Xiangya Hospital, Central South University, Changsha 410013, China.
Objectives: In recent years, the role of remnant cholesterol (RC) in the development and progression of cardiovascular diseases has gained increasing attention. However, evidence on the association between RC and subclinical atherosclerosis is limited. This study aims to examine the relationship between RC and atherosclerotic plaques in single and multiple vascular territories.
View Article and Find Full Text PDFNanoscale Horiz
September 2025
Theoretical Chemical Physics Group, Research Institute for Materials Science and Engineering, University of Mons, 20 Place du Parc, Mons B-7000, Belgium.
Two-photon spontaneous emission (TPSE) is a second-order quantum process with promising applications in quantum optics that remains largely unexplored in molecular systems, which are usually very inefficient emitters. In this work, we model the first molecular two-photon emitters and establish the design rules, highlighting their differences from those governing two-photon absorbers. Using both time-dependent density functional theory and Pariser-Parr-Pople calculations, we calculate TPSE in three π-conjugated molecules and identify a dominant pathway.
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