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Maintaining microbiome structure is critical for the health of both plants and animals. By re-screening a collection of Arabidopsis mutants affecting root immunity and hormone crosstalk, we identified a FERONIA (FER) receptor kinase mutant (fer-8) with a rhizosphere microbiome enriched in Pseudomonas fluorescens without phylum-level dysbiosis. Using microbiome transplant experiments, we found that the fer-8 microbiome was beneficial. The effect of FER on rhizosphere pseudomonads was largely independent of its immune scaffold function, role in development and jasmonic acid autoimmunity. We found that the fer-8 mutant has reduced basal levels of reactive oxygen species (ROS) in roots and that mutants deficient in NADPH oxidase showed elevated rhizosphere pseudomonads. The addition of RALF23 peptides, a FER ligand, was sufficient to enrich P. fluorescens. This work shows that FER-mediated ROS production regulates levels of beneficial pseudomonads in the rhizosphere microbiome.
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http://dx.doi.org/10.1038/s41477-021-00914-0 | DOI Listing |
Environ Microbiol Rep
October 2025
Colegio de Ciencias Biológicas y Ambientales, Universidad San Francisco de Quito, Quito, Ecuador.
Plant roots are colonised by diverse communities of microorganisms that can affect plant growth and enhance plant resistance to (a) biotic stresses. We investigated the role of the indigenous soil microbiome in the resistance of tomato to the invasive sap-sucking insect Prodiplosis longifila (Diptera: Cecidomyiidae). Native and agricultural soils were sampled from the Andes in Southern Ecuador and tested, in greenhouse bioassays, for leaf tissue damage caused by P.
View Article and Find Full Text PDFSci Total Environ
September 2025
Department of Environmental Science, Aarhus University, Frederiksborgvej 399, 4000 Roskilde, Denmark; WATEC, Centre for Water Technology, Aarhus University, Ny Munkegade 120, 8000 Aarhus C, Denmark.
Treatment wetlands (TW) are a popular choice for decentralized wastewater treatment, with substantial documentation on their capacity to manage conventionally monitored pollutants. However, most insights into their effectiveness against emerging contaminants come from lab and mesocosm studies with a limited number of compounds, highlighting knowledge gaps in their performance at full scale. This study provides a first long-term, full-scale assessment of TW ability to remove a large number of organic micropollutants (OMPs) and manage antibiotic resistance under real-world conditions.
View Article and Find Full Text PDFWorld J Microbiol Biotechnol
September 2025
Department of Microbiology, University of Georgia, Athens, GA, 30602, USA.
While PGPB have historically been applied in agriculture, their formal recognition in the last century has driven intensive research into their role as sustainable tools for improving crop yield and stress tolerance. As they are primarily sourced from wild or native environments, the widespread enthusiasm has led to heightened expectations surrounding their potential, often based on the assumption that biological solutions are inherently safer and more effective than synthetic inputs. However, despite their popularity, increasing reports of inconsistent or limited performance under real-world, field conditions have raised critical questions about their credibility as biofertilizers and biocontrol agents.
View Article and Find Full Text PDFJ Exp Bot
September 2025
Department of Biosciences, University of Milan, Via Giovanni Celoria 26, 20133, Milan (MI), Italy.
Heterosis refers to the superior performance of hybrids over their parents (inbred lines) in one or more characteristics. Hence, understanding this process is crucial for addressing food insecurity. This review explores the traditional genetic models proposed to explain heterosis and integrates them with emerging perspectives such as epigenetic studies and multi-omics approaches which are increasingly used to investigate the molecular basis of heterosis in plants.
View Article and Find Full Text PDFFood Res Int
November 2025
Department of Agricultural, Forest and Food Sciences, University of Turin, Largo Braccini 2, 10095 Grugliasco, Italy; Interdepartmental Centre for Grapevines and Wine Sciences, University of Turin, Corso Enotria 2/C, 12051 Alba, Italy. Electronic address:
Microorganisms colonizing grapevines possess diverse functional capabilities that influence the health, growth, productivity and, consequently, wine quality. In this study, spatial and temporal dynamics of the microbiome of Vitis vinifera cv. Barbera grapevine were determined by shotgun sequencing.
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