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A bacterial strain, SD-g, was isolated from a soil sample collected on Dokdo Island, South Korea. Cells were observed to be Gram stain negative and short rod shaped, and colonies to be pink in color. Growth of the isolate was observed at 4-30 °C, pH 6-8, and in the presence of 0-2.0% NaCl. Analysis of 16S rRNA gene sequences identified strain SD-g as a member of the genus Mucilaginibacter in the family Sphingobacteriaceae, with high levels of sequence similarity with Mucilaginibacter terrenus ZH6 (96.9%), Mucilaginibacter lutimaris BR-3 (96.8%), Mucilaginibacter carri PR0008K (96.8%), Mucilaginibacter gilvus F01003 (96.7%), Mucilaginibacter litoreus BR-18 (96.6%), and Mucilaginibacter terrigena 17JY9-4 (96.5%). The genomic DNA G+C content of strain SD-g was calculated to be 40.6 mol%. The predominant respiratory quinone of the isolate was found to be MK-7; the main polar lipid was phosphatidylethanolamine; and the major fatty acids were identified as summed feature 3 (C ω7c/C ω6c; 29.0%), C iso (19.1%), C iso (28.1%), C (14.9%), and C iso 3-OH (7.4%). The digital DNA-DNA hybridization (dDDH) and average nucleotide identity (ANI) values between strain SD-g and M. terrenus ZH6, M. gilvus F01003, and M. terrigena ranged from 17.7 to 18.4% and 72.1 to 74.0%, respectively. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain SD-g represents a novel species in the genus Mucilaginibacter, for which the name Mucilaginibacter segetis sp. nov. is proposed. The type strain is SD-g (= KCTC 82353 = JCM 34284).
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http://dx.doi.org/10.1007/s00284-021-02495-9 | DOI Listing |
Autophagy
July 2025
Department of Biochemistry and Department of Hepatobiliary and Pancreatic Surgery, The First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang, China.
Macroautophagy/autophagy is an evolutionarily conserved intracellular degradation pathway that relies on vacuoles or lysosomes. Over 40 genes have been identified in yeast cells as participants in various types of autophagy, although these genes are non-essential. While some essential genes involved in autophagy have been identified using temperature-sensitive yeast strains, systematic research on essential genes in autophagy remains lacking.
View Article and Find Full Text PDFCurr Microbiol
June 2021
School of Applied Biosciences, Kyungpook National University, Daegu, 41566, Republic of Korea.
A bacterial strain, SD-g, was isolated from a soil sample collected on Dokdo Island, South Korea. Cells were observed to be Gram stain negative and short rod shaped, and colonies to be pink in color. Growth of the isolate was observed at 4-30 °C, pH 6-8, and in the presence of 0-2.
View Article and Find Full Text PDFMol Pathol
February 2003
Department of Microbiology, The University of Hong Kong, University Pathology Building, Queen Mary Hospital, Hong Kong.
Aims: To characterise a strain of Gram negative aerobic straight or slightly curved rods (HKU3) isolated from the blood culture of a 9 year old Chinese boy with neutropenic fever and pseudobacteraemia.
Methods: The isolate was phenotypically investigated by standard biochemical methods using conventional biochemical tests, scanning electron microscopy, and transmission electron microscopy. Genotypically, the 16S rRNA gene of the bacterium was amplified by the polymerase chain reaction (PCR) and sequenced.
J Appl Physiol (1985)
July 1995
Meakins-Christie Laboratories, McGill University Clinic, Royal Victoria, General Hosptial, Montreal, Quebec, Canada.
To develop a method for the study of mucociliary clearance in small-caliber airways, we investigated ciliary function in an in vitro lung tissue culture technique in mice. Lungs were excised from 45 anesthetized mice [weight 30.9 +/- 6.
View Article and Find Full Text PDFInfection
November 1990
VA Medical Center, Infectious Disease Laboratory, Augusta, GA 30910.
We report a model of chronic Pseudomonas aeruginosa osteomyelitis in the rat that was reproducible, simple and inexpensive. No promoting agent was required to cause infection. Infected animals yielded consistent pseudomonal colony counts (log): 4.
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