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Forest soils play an important role in controlling global warming by reducing atmospheric methane (CH) concentrations. However, little attention has been paid to how nitrogen (N) deposition may alter microorganism communities that are related to the CH cycle or CH oxidation in subtropical forest soils. We investigated the effects of N addition (0, 30, 60, or 90 kg N ha yr) on soil CH flux and methanotroph and methanogen abundance, diversity, and community structure in a Moso bamboo (Phyllostachys edulis) forest in subtropical China. N addition significantly increased methanogen abundance but reduced both methanotroph and methanogen diversity. Methanotroph and methanogen community structures under the N deposition treatments were significantly different from those of the control. In N deposition treatments, the relative abundance of Methanoculleus was significantly lower than that in the control. Soil pH was the key factor regulating the changes in methanotroph and methanogen diversity and community structure. The CH emission rate increased with N addition and was negatively correlated with both methanotroph and methanogen diversity but positively correlated with methanogen abundance. Overall, our results suggested that N deposition can suppress CH uptake by altering methanotroph and methanogen abundance, diversity, and community structure in subtropical Moso bamboo forest soils.
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http://dx.doi.org/10.1038/s41598-021-84422-3 | DOI Listing |
mSystems
September 2025
Graduate School of Oceanography, University of Rhode Island, Narragansett, Rhode Island, USA.
Dinitrogen (N) fixation provides bioavailable nitrogen to the biosphere. However, in some habitats (e.g.
View Article and Find Full Text PDFAnaerobic methanotrophic archaea (ANME) are crucial to planetary carbon cycling. They oxidise methane in anoxic niches by transferring electrons to nitrate, metal oxides, or sulfate-reducing bacteria. No ANMEs have been isolated, hampering the biochemical investigation of anaerobic methane oxidation.
View Article and Find Full Text PDFNew Phytol
September 2025
Canadian Forest Service, Natural Resources Canada, Laurentian Forestry Centre, 1055 Rue du Peps, Québec, QC, G1V 4C7, Canada.
Despite the increasing number of studies investigating tree methane fluxes, the relationships between tree methane fluxes and species traits remain mostly unexplored. We measured leaf and stem methane fluxes of five tree species (Acer saccharinum, Fraxinus nigra, Ulmus americana, Salix nigra, and Populus spp.) in the floodplain of Lake St-Pierre (Québec) and examined how these fluxes vary with species traits (wood density, humidity, pH; leaf water content, pH, stomatal conductance; methanogen and methanotroph relative abundances (RAs) in leaf, wood, and bark).
View Article and Find Full Text PDFISME Commun
January 2025
Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), PO Box 50, 6700AB Wageningen, the Netherlands.
The global atmospheric concentration of the potent greenhouse gas methane (CH) is rising rapidly, and agriculture is responsible for 30%-50% of the yearly CH emissions. To limit its global warming effects, strong and sustained reductions are needed. Sustainable agricultural management strategies, as the use of organic amendments like compost, have previously proven to have a potent CH mitigation effect in laboratory experiments.
View Article and Find Full Text PDFISME Commun
January 2025
Frontiers Science Center for Deep Ocean Multispheres and Earth System, Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, Qingdao 266100, China.
Ocean circulations and water mass exchange can exert significant influences on seawater biogeochemistry, microbial communities, and carbon cycling in marine systems. However, the detailed mechanisms of the impacts of physical processes in the open ocean on the cycle of greenhouse gases, particularly methane, remain poorly understood. In this study, we integrated high-resolution underway observations, experimental incubations, radioisotope labelling, and molecular analysis to constrain the controls of methanogenic pathways, methanotrophic activity, and emission fluxes in the highly hydrodynamic Kuroshio and Oyashio Extension (KOE) region of the Northwest Pacific.
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