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GUN1 (genomes uncoupled 1), a chloroplast-localized pentatricopeptide repeat (PPR) protein with a C-terminal small mutS-related (SMR) domain, plays a central role in the retrograde communication of chloroplasts with the nucleus. This flow of information is required for the coordinated expression of plastid and nuclear genes, and it is essential for the correct development and functioning of chloroplasts. Multiple genetic and biochemical findings indicate that GUN1 is important for protein homeostasis in the chloroplast; however, a clear and unified view of GUN1's role in the chloroplast is still missing. Recently, GUN1 has been reported to modulate the activity of the nucleus-encoded plastid RNA polymerase (NEP) and modulate editing of plastid RNAs upon activation of retrograde communication, revealing a major role of GUN1 in plastid RNA metabolism. In this opinion article, we discuss the recently identified links between plastid RNA metabolism and retrograde signaling by providing a new and extended concept of GUN1 activity, which integrates the multitude of functional genetic interactions reported over the last decade with its primary role in plastid transcription and transcript editing.
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http://dx.doi.org/10.3390/cells9102307 | DOI Listing |
PLoS One
September 2025
Horticultural Sciences Department, University of Florida, Gainesville, Florida, United States of America.
The study of plant biology has traditionally focused on investigations conducted at the tissue, organ, or whole plant level. However, single-cell transcriptomics has recently emerged as an important tool for plant biology, enabling researchers to uncover the expression profiles of individual cell types within a tissue. The application of this tool has revealed new insights into cell-to-cell gene expression heterogeneity and has opened new avenues for research in plant biology.
View Article and Find Full Text PDFMitochondrial DNA B Resour
September 2025
Department of Forestry and Nature Resources, National Chiayi University, Chiayi, Taiwan.
Hayata 1916 is a unique bamboo species endemic to Taiwan, typically found at elevations ranging from 500 to 1,500 meters. This study provides a detailed analysis of the complete chloroplast genome of for the first time. The genome spans 139,664 base pairs (bp) and consists of a large single-copy (LSC) region of 83,192 bp, a small single-copy (SSC) region of 12,869 bp, and two inverted repeat (IR) regions, each 21,798 bp in length.
View Article and Find Full Text PDFPlant J
September 2025
Institute of Molecular Biology, University of Oregon, Eugene, Oregon, 97403, USA.
Translation of the chloroplast psbA mRNA in angiosperms is activated by photodamage of its gene product, the D1 subunit of photosystem II (PSII), providing nascent D1 for PSII repair. The involvement of chlorophyll in the regulatory mechanism has been suggested due to the regulatory roles of proteins proposed to mediate chlorophyll/D1 transactions and the fact that chlorophyll is synthesized only in the light in angiosperms. We used ribosome profiling and RNA-seq to address whether the effects of light on chloroplast translation are conserved in the liverwort Marchantia (Marchantia polymorpha), which synthesizes chlorophyll in both the dark and the light.
View Article and Find Full Text PDFFront Plant Sci
August 2025
Rice Science Center, Kasetsart University, Nakhon Pathom, Thailand.
Introduction: Rice is mainly consumed by half of the world's population. The imminent climate change and population growth expected in the next 30 years will outpace the current rice production capacity, posing risks to food and nutrition security in developing nations. One simplified approach to address this challenge is to improve photosynthetic capacity by increasing chlorophyll content in leaves and stems.
View Article and Find Full Text PDFPlant Cell Rep
September 2025
Key Laboratory of Germplasm Innovation for the Upper Reaches of the Yangtze River, Ministry of Agriculture and Rural Affairs, Chongqing, 400715, China.
The gene ZmDof08, which underlies the yellow-green leaf mutant phenotype in maize, enhances the activity of key enzymes involved in C photosynthesis, leading to a significant improvement in photosynthetic efficiency. Improving the photosynthetic efficiency of maize to increase its yield has long been a key focus in global agricultural research. Maize possesses a rich resource of leaf color mutants, which serve as valuable materials for studying leaf photosynthesis.
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