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It remains challenging to automatically segment kidneys in clinical ultrasound (US) images due to the kidneys' varied shapes and image intensity distributions, although semi-automatic methods have achieved promising performance. In this study, we propose subsequent boundary distance regression and pixel classification networks to segment the kidneys automatically. Particularly, we first use deep neural networks pre-trained for classification of natural images to extract high-level image features from US images. These features are used as input to learn kidney boundary distance maps using a boundary distance regression network and the predicted boundary distance maps are classified as kidney pixels or non-kidney pixels using a pixelwise classification network in an end-to-end learning fashion. We also adopted a data-augmentation method based on kidney shape registration to generate enriched training data from a small number of US images with manually segmented kidney labels. Experimental results have demonstrated that our method could automatically segment the kidney with promising performance, significantly better than deep learning-based pixel classification networks.
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http://dx.doi.org/10.1016/j.media.2019.101602 | DOI Listing |
Eur J Radiol
August 2025
Department of Radiology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA.
Purpose: To evaluate whether AI-assisted ipsilateral tissue matching in digital breast tomosynthesis (DBT) reduces localization errors beyond typical tumor boundaries, particularly for non-expert radiologists. The technology category is deep learning.
Materials And Methods: The study consisted of two parts.
Environ Sci Technol
September 2025
Department of Biomedical Informatics, Harvard Medical School, 10 Shattuck St, Boston, Massachusetts 02115, United States.
Accurate attribution of the areas and populations impacted by climate-related events often relies on linear distance-based methods, where the study unit is assigned temperature data to the closest weather station. We developed a novel method and data pipeline that provides a grid-based measure of exposure to extreme heat and cold events called Grid EXposure (, enabling linkage to individual-level human health data at different spatial scales. GridEX automates the gathering of station-based climatological data and provides estimates of apparent temperature, offering a more comprehensive representation of human thermal comfort and perceived temperature.
View Article and Find Full Text PDFCureus
August 2025
Department of Radiology, Aichi Medical University, Nagakute, JPN.
Background This study was conducted to examine the effects of moving the isocenter (IC) position from the lesion to the center of the brain on stereotactic radiosurgery (SRS) planning with volumetric-modulated arcs (VMA) using the High-Definition Dynamic Radiosurgery (HDRS) platform, a combination of the Agility multileaf collimator (MLC) (Elekta AB, Stockholm, Sweden) and the Monaco planning system (Elekta AB), for single brain metastases (BMs). Methodology The study subject included 36 clinical BMs with the gross tumor volume (GTV) ranging from 0.04 to 48.
View Article and Find Full Text PDFClin Neuroradiol
September 2025
Department of Radiology, Beijing Chao-Yang Hospital, No. 8 GongrenTiyuchangNanlu, Chaoyang District, 100020, Beijing, China.
Background: Non-contrast computed tomography (NCCT) is a first-line imaging technique for determining treatment options for acute ischemic stroke (AIS). However, its poor contrast and signal-to-noise ratio limit the diagnosis accuracy for radiologists, and automated AIS lesion segmentation using NCCT also remains a challenge. This study aims to develop a segmentation method for ischemic lesions in NCCT scans, combining symmetry-based principles with the nnUNet segmentation model.
View Article and Find Full Text PDFJ Mol Biol
September 2025
Department of Chemical and Biomolecular Engineering, University of Pennsylvania, Philadelphia, PA 19104, USA; Department of Cell and Developmental Biology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address:
The precise spatial and temporal regulation of gene expression through enhancer-promoter (E-P) interactions represents a fundamental mechanism underlying cellular differentiation and organismal development in multicellular eukaryotes. Despite extensive studies on enhancer-mediated gene regulation, a systematic understanding of how specific E-P configurations affect transcriptional dynamics remains incomplete. Recent advances in live-imaging, single-cell assays, and chromatin conformation capture technologies have enabled unprecedented insights into these dynamic regulatory processes by providing temporal resolution and single-cell specificity that complement traditional population-based approaches.
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