Complete genome sequence of Arthrobacter sp. ZXY-2 associated with effective atrazine degradation and salt adaptation.

J Biotechnol

State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, 150090, Harbin, China. Electronic address:

Published: April 2017


Category Ranking

98%

Total Visits

921

Avg Visit Duration

2 minutes

Citations

20

Article Abstract

An atrazine-degrading strain Arthrobacter sp. ZXY-2 was originally isolated from Jilin Pesticide Plant (China). Strain ZXY-2 demonstrated excellent atrazine degradation performance and saline tolerance. Here we report the complete genome sequence of strain ZXY-2 contained a circular chromosome and five circular plasmids encoding for the mechanism of salt adaptation and pollutant degradation.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jbiotec.2017.03.010DOI Listing

Publication Analysis

Top Keywords

complete genome
8
genome sequence
8
arthrobacter zxy-2
8
atrazine degradation
8
salt adaptation
8
strain zxy-2
8
sequence arthrobacter
4
zxy-2
4
zxy-2 associated
4
associated effective
4

Similar Publications

Background: The river ecosystems provide habitats and source of water for a number of species including humans. The uncontrolled accumulation of pollutants in the aquatic environment enhances the development of antibiotic-resistant bacteria and genes.

Methods: Water samples were collected seasonally from different sites of Gomti and Ganga River.

View Article and Find Full Text PDF

The first complete plastid genome of the critically endangered species Valeriana trinervis was sequenced, assembled and compared with other published Valeriana plastomes. In this study, we assembled the plastid genome of the critically endangered, endemic species Valeriana trinervis (= Centranthus trinervis) and compare it with all published plastomes of Valeriana. We found not only differences in the inverted repeats boundaries, in the type and abundance of repeats, but also similarities in codon usage and microsatellite numbers.

View Article and Find Full Text PDF

Pseudoduganella rhizocola sp. nov., Isolated from Rhizospheric Soil.

Curr Microbiol

September 2025

Department of Integrative Biotechnology, Sungkyunkwan University, Natural Science Campus, 2066 Seobu-ro, Jangan-Gu, Suwon-Si, Gyeonggi-Do, 16419, Republic of Korea.

A novel bacterial strain, SM-13 was isolated from the rhizospheric soil of Epipremnum aureum (Jade Pothos) sampled in Suwon, Republic of Korea. The isolate was Gram-stain-negative, aerobic, motile, rod-shaped, cream-coloured, oxidase- and catalase-positive. Strain SM-13 grew at the range of 15-37 °C (optimum, 25 °C), at pH 6.

View Article and Find Full Text PDF

IBDV-SSA, a novel molecular approach for the recovery of infectious bursal disease virus whole genomes from FTA cards.

Microbiol Spectr

September 2025

United States Department of Agriculture, Agricultural Research Service (USDA-ARS), Southeast Poultry Research Laboratories, US National Poultry Research Center, Athens, Georgia, USA.

Infectious bursal disease (IBD), a highly contagious viral disease in young chickens, poses significant economic losses due to high mortality and immunosuppression. While IBD virus (IBDV) virulence is influenced by multiple genes, whole-genome sequencing (WGS) of IBDV is crucial for defining the strain pathotype and clinical profile. Flinders Technology Associates (FTA) cards are convenient for field sample collection, but their filter paper matrix can hinder nucleic acid recovery, impacting sequencing efficiency.

View Article and Find Full Text PDF

The complete genomes of three isolates were collected from the same patient in 2014, 2015, and 2016. NIH-016-2 is susceptible to eight antibiotics, while the other two are resistant to 11 commonly used antibiotics. Isolates were sequenced using Nanopore and Illumina short-read technologies.

View Article and Find Full Text PDF