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In this study, we cloned the myeloperoxidase () gene of zebrafish and prepared a digoxigenin-labeled RNA probe to investigate gene expression in zebrafish during embryonic development by whole-mount hybridization (WISH). The earliest expression was detected in cells of the intermediate cell mass (ICM) at 18 h post-fertilization (hpf). It was detected 1 to 2 h later in cells in the rostral blood island (RBI) and strong signals were observed in the anterior ICM. Then, it spread over the yolk sac. By 72 hpf these -expressing cells were in the circulation and distributed throughout the embryo. We identified that the level of expression detected by WISH at an early stage was consistent with the data of cytological analyses of adult fish. The use of this method enabled us to track the gene changes that took place before morphological phenotypes were detected, as well to as investigate the hematopoietic cell fate in mutational or transgenic models . In this study, we modified several steps of WISH. The improved hybridization results demonstrated high specificity, distinct coloration and low background figures.
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http://dx.doi.org/10.3892/etm.2013.947 | DOI Listing |
Gene Expr Patterns
September 2025
Experimental Research Center, QingPu Hospital Affiliated to Fudan University, Shanghai, China.
The SH2B family, which includes SH2B1, SH2B2, and SH2B3, consists of adaptor proteins that possess conserved Src homology 2 (SH2) and pleckstrin homology (PH) domains, playing essential roles as signaling mediators. However, the gene expression patterns of this family during embryonic development are still mostly unclear. In this study, we first investigated the evolutionary conservation of SH2B across multiple species using phylogenetic analysis, which revealed high sequence homology between zebrafish Sh2b and its orthologs in other vertebrates.
View Article and Find Full Text PDFFish Shellfish Immunol
September 2025
National and Provincial Joint Engineering Research Centre for Marine Germplasm Resources Exploration and Utilization, School of Marine Science and Technology, Zhejiang Ocean University, 1st Haidanan Road, Changzhi Island, Lincheng, Zhoushan 316022, China. Electronic address:
In mammals, neuropeptide Y (NPY) has been recognized for its role in modulating the immune response of host. However, invertebrate neuropeptide F (NPF), as a homologous gene of NPY, has been minimally explored immunomodulatory function. In this study, NPF and NPF receptor (NPFR) mRNAs were significantly up-regulated in sick Sepiella japonica, and in juvenile S.
View Article and Find Full Text PDFGenesis
August 2025
A.V. Zhirmunsky National Scientific Center of Marine Biology, Far Eastern Branch, Russian Academy of Sciences, Vladivostok, Russia.
Secreted Frizzled-related proteins (SFRPs) are a small, ancient family of extracellular signaling pathway agonists and antagonists. In this study, we examined their expression patterns during regeneration in the holothurian Eupentacta fraudatrix using whole-mount in situ hybridization. Our results suggest that both genes are involved in proper water-vascular system formation and coelomic epithelium homeostasis in holothurians.
View Article and Find Full Text PDFMethods Mol Biol
July 2025
Cell and Developmental Biology Center, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, MD, USA.
Fluorescence in situ hybridization (FISH) to visualize DNA or chromosomes in cells is well recognized as a valuable and versatile technique. The recent development of Oligopaint FISH is particularly useful for studies of chromosome structure, function, and evolution. Here, we describe a series of protocols for applying the Oligopaint FISH technique to mouse oocytes, eggs, and early-stage embryos.
View Article and Find Full Text PDFJ Vis Exp
July 2025
Department of Physiology and Biophysics, University of Colorado Anschutz Medical Center;
The complex laminar structure of the retina presents significant challenges for comprehensive spatial molecular mapping. Current techniques for investigating tissue architecture and molecular interactions are limited by technical constraints that compromise spatial relationships or restrict molecular profiling. Existing methods like cross-sectioning, whole mount preparations, chemical or mechanical dissociations, and thick en face sections either disrupt tissue integrity, lose critical spatial context, or most often, are simply incompatible with high-dimensional spatial sequencing platforms.
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