98%
921
2 minutes
20
Solid-state magic-angle-spinning (MAS) NMR of proteins has undergone many rapid methodological developments in recent years, enabling detailed studies of protein structure, function and dynamics. Software development, however, has not kept pace with these advances and data analysis is mostly performed using tools developed for solution NMR which do not directly address solid-state specific issues. Here we present additions to the CcpNmr Analysis software package which enable easier identification of spinning side bands, straightforward analysis of double quantum spectra, automatic consideration of non-uniform labelling schemes, as well as extension of other existing features to the needs of solid-state MAS data. To underpin this, we have updated and extended the CCPN data model and experiment descriptions to include transfer types and nomenclature appropriate for solid-state NMR experiments, as well as a set of experiment prototypes covering the experiments commonly employed by solid-sate MAS protein NMR spectroscopists. This work not only improves solid-state MAS NMR data analysis but provides a platform for anyone who uses the CCPN data model for programming, data transfer, or data archival involving solid-state MAS NMR data.
Download full-text PDF |
Source |
---|---|
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3222832 | PMC |
http://dx.doi.org/10.1007/s10858-011-9569-2 | DOI Listing |
Magn Reson Lett
November 2024
Sorbonne Université, CNRS, Laboratoire de Chimie de la Matière Condensée de Paris, LCMCP, UMR 7574, 75005 Paris, France.
Elastomer blends, among which natural rubber (NR) and butadiene rubber (BR), are involved in many components of the automotive/tire industry. A comprehensive understanding of their mechanical behavior requires, among other features, a detailed description of the cross-link density in these mixtures. In the case of vulcanized immiscible blends, the distribution of the cross-link density within each of the NR- and BR-rich domains is key information, but difficult to determine using the conventional approaches used for one-component cross-linked elastomers.
View Article and Find Full Text PDFAnal Chem
September 2025
Embrapa Instrumentation, Rua XV de Novembro 1452, São Carlos, São Paulo 13560-970, Brazil.
Chocolates and other cocoa products represent a multibillion-dollar industry that has faced significant price increases, largely due to a surge in cocoa plant diseases linked to climate change. One potential solution for mitigating cocoa prices involves the use of cocoa butter equivalents, substitutes, or replacers. Consequently, a rapid method for simultaneously determining multiple properties of cocoa derivatives can serve as a valuable tool for research and development of new products, quality control, and regulatory agencies to ensure compliance with cocoa product standards.
View Article and Find Full Text PDFJ Am Chem Soc
September 2025
Department of Materials Science and Engineering, Korea University, Seoul 02841, Republic of Korea.
The thermodynamic equilibrium assumption often invoked in modeling ion migration in solid-state materials remains insufficient to capture the true migration behavior of Li ions, particularly in less-crystalline superionic conductors that exhibit anomalously high Li ion conductivity. Such materials challenge classical frameworks and necessitate a lattice dynamics-based perspective that explicitly accounts for nonequilibrium phonon interactions and transient structural responses. Here, we uncover a phonon-governed Li ion migration mechanism in garnet-structured superionic conductors by comparing Ta-doped LiLaZrTaO (LLZTO4) to its undoped analogue, LiLaZrAlO (LLZO).
View Article and Find Full Text PDFJ Phys Chem Lett
September 2025
The Province and Ministry Co-sponsored Collaborative Innovation Center for Medical Epigenetics, Tianjin Key Laboratory on Technologies Enabling Development of Clinical Therapeutics and Diagnostics, School of Pharmacy, Tianjin Medical University, Tianjin, 300070, P. R. China.
Dynamic nuclear polarization (DNP) has emerged as a powerful technique to overcome the sensitivity limit of solid-state nuclear magnetic resonance (ssNMR) spectroscopy through polarizing agents (PAs) carrying unpaired electrons. Nitroxide biradical-based PAs have garnered great attention due to their superior DNP performance. Here, we report TJPols─water-soluble acrylamide-linked nitroxide biradicals featuring facile large-scale synthesis.
View Article and Find Full Text PDFAnal Bioanal Chem
August 2025
Applied Analytical Chemistry, University of Duisburg-Essen, Universitaetsstr. 5, 45141, Essen, Germany.
An L-lysine-derived stationary phase comprising a 2C18 alkyl chain with embedded polar groups, including two urea and one amide functionalities (Sil-Lys-2C18), was synthesized for the application in 1D- and 2D-LC for the first time. The same stationary phase was packed into 150 × 2.1 mm and 30 × 3 mm for the first and second dimensions, respectively, and named the short column Sil-Lys-2C18-S.
View Article and Find Full Text PDF