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Kar2p, an essential Hsp70 chaperone in the endoplasmic reticulum of Saccharomyces cerevisiae, facilitates the transport and folding of nascent polypeptides within the endoplasmic reticulum lumen. The chaperone activity of Kar2p is regulated by its intrinsic ATPase activity that can be stimulated by two different nucleotide exchange factors, namely Sil1p and Lhs1p. Here, we demonstrate that the binding requirements for Lhs1p are complex, requiring both the nucleotide binding domain plus the linker domain of Kar2p. In contrast, the IIB domain of Kar2p is sufficient for binding of Sil1p, and point mutations within IIB specifically blocked Sil1p-dependent activation while remaining competent for activation by Lhs1p. Taken together, these results demonstrate that the interactions between Kar2p and its two nucleotide exchange factors can be functionally resolved and are thus mechanistically distinct.
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http://dx.doi.org/10.1074/jbc.M110.111211 | DOI Listing |
J Cell Biol
October 2025
Cell and Systems Biology Program, Hospital for Sick Children, Toronto, Canada.
Mitochondria continually undergo fission to maintain their network and health. Nascent fission sites are marked by the ER, which facilitates actin polymerization to drive calcium flux into the mitochondrion and constrict the inner mitochondrial membrane. Septins are a major eukaryotic cytoskeleton component that forms filaments that can both directly and indirectly modulate other cytoskeleton components, including actin.
View Article and Find Full Text PDFThe composition of the primordial genetic material remains uncertain. Studies of duplex structure and stability, and of nonenzymatic template copying chemistry, provide insight into the viability of potentially primordial genetic polymers. Recent work suggests that 2'- deoxyribo-purine nucleotides may have been generated together with ribonucleotides on the early Earth.
View Article and Find Full Text PDFBiochem J
September 2025
Institute of Pharmaceutical Chemistry, Goethe University, Frankfurt , 60438, Germany.
The Rab GTPase switch-2 region is a hotspot for post-translational modifications. Its phosphorylation can determine whether individuals develop Parkinson's disease or not. Other modifications of the same region are catalyzed by enzymes from bacterial pathogens when they infect human cells.
View Article and Find Full Text PDFBMC Genomics
September 2025
Laboratory of Molecular Genetics, Institute of Plant Biology and Biotechnology, Almaty, 050040, Kazakhstan.
Background: Soybean (Glycine max) is a globally important crop, yet its genetic diversity remains underutilized in breeding programs, particularly in emerging production regions such as Kazakhstan. As Kazakhstan expands its soybean cultivation, a detailed understanding of the genetic diversity and population structure of both local and international germplasm is critical for developing regionally adapted cultivars.
Results: This study analyzed 694 soybean accessions - including landraces, modern cultivars, and wild relatives (Glycine soja) - using 80,971 high-quality SNPs obtained via whole-genome resequencing.
Sci China Life Sci
August 2025
Sichuan Provincial Key Laboratory for Human Disease Gene Study and the Center for Medical Genetics, Department of Laboratory Medicine, Sichuan Academy of Medical Sciences and Sichuan Provincial People's Hospital, School of Medicine, University of Electronic Science and Technology of China, Chengdu,
Primary open-angle glaucoma (POAG) is the leading cause of irreversible blindness worldwide, primarily due to the degeneration of retinal ganglion cells (RGCs). In this study, we reported vav guanine nucleotide exchange factor 2 (VAV2) as a POAG-associated gene. Through whole exome sequencing (WES) of 398 Han Chinese POAG patients and 2,010 controls, we discovered nine rare VAV2 variants linked to POAG (P_burden=1.
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