Category Ranking
98%
Total Visits
921
Avg Visit Duration
2 minutes
Citations
20
Article Abstract
Summary: Mauve Contig Mover provides a new method for proposing the relative order of contigs that make up a draft genome based on comparison to a complete or draft reference genome. A novel application of the Mauve aligner and viewer provides an automated reordering algorithm coupled with a powerful drill-down display allowing detailed exploration of results.
Availability: The software is available for download at http://gel.ahabs.wisc.edu/mauve.
Download full-text PDF |
Source |
|---|---|
| http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2723005 | PMC |
| http://dx.doi.org/10.1093/bioinformatics/btp356 | DOI Listing |
Publication Analysis
Top Keywords
Similar Publications
A Highly Contiguous Genome Assembly for the Wrentit (Chamaea Fasciata), the Sole Representative of the Babbler Radiation in the Americas.
J Hered
September 2025
Museum of Vertebrate Zoology, University of California Berkeley, Berkeley, CA 94720, United States.
The wrentit (Chamaea fasciata) is a chaparral and scrub specialist bird found from coastal Oregon to northern Baja California. We generated a draft reference assembly for the species using PacBio HiFi long read and Omni-C chromatin-proximity sequencing data as part of the California Conservation Genomics Project (CCGP). Sequenced reads were assembled into 1342 scaffolds totaling 1.
View Article and Find Full Text PDFDraft genome of the Cuban Painted Landsnail Polymita picta, International Mollusc of the year 2022.
BMC Genom Data
September 2025
Senckenberg Research Institute and Museum, Frankfurt, Germany.
Objective: The Cuban Painted Landsnail is an iconic endemic tree snail species with distinctive colourful shells used in traditional handicrafts. This species won the International Mollusc of the Year 2022 competition in an open public vote. As the competition prize, we have assembled the draft genome of this species.
View Article and Find Full Text PDFFrom Fragmentation to Resolution: High-Fidelity Genome Assembly of Zancudomyces culisetae through Comparative Insights from PacBio, Nanopore, and Illumina Sequencing.
G3 (Bethesda)
September 2025
Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada M5S 3B2.
Zancudomyces culisetae is an obligate symbiotic fungus inhabiting the digestive tracts of aquatic insect larvae, including black flies, midges, and mosquitoes. With a global distribution and high prevalence in disease-transmitting insects, Z. culisetae serves as a model for studying insect gut fungi.
View Article and Find Full Text PDFHealthcare-related transmission of mobile genetic elements co-carrying and 16S rRNA methyltransferase genes in multiple .
Microb Genom
August 2025
Antimicrobial Resistance and Microbial Ecology Group, School of Medicine, University of Galway, Galway, Ireland.
Aminoglycosides are used in the treatment of serious infections with Gram-negative bacteria, especially those resistant to beta-lactams and carbapenems. 16S rRNA methyltransferases (16S-RMTase) are capable of conferring resistance to nearly all aminoglycosides. They are sometimes detected in combination with .
View Article and Find Full Text PDFDraft genome sequence of SZCHProba001, isolated from feces of a 6-year-old boy.
Microbiol Resour Announc
August 2025
International Medical Center, Endoscopy Center and Gastroenterology Department Shenzhen Children's Hospital, Shenzhen, China.
is a prevalent human gut bacterium. Here, we report the draft genome of SZCHProba001 isolated from a 6-year-old boy's feces. The 5.
View Article and Find Full Text PDF