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Self-interaction of macromolecules has been shown to play an important role in a number of physical processes, including crystallization, solubility, viscosity, and aggregation. Peptide self-interaction is not as well studied as for larger proteins, but should play an equally important role. The osmotic second virial coefficient, B, can be used to quantify peptide and protein self-interaction. B values are typically measured using static light scattering (SLS). Peptides, however, do not scatter enough light to allow such measurements. This study describes the first use of self-interaction chromatography (SIC) for the measurement of peptide B values because SIC does not have the molecular size limitations of SLS. In the present work, SIC was used to measure B for enfuvirtide, a 36-amino acid therapeutic peptide, as a function of salt concentration, salt type, and pH. B was found to correlate strongly with solubility and apparent molecular weight. In general, the solubility of enfuvirtide increases with pH from 6 to 10 and decreases as the salt concentration increases from 0 to 0.5M for three different salts. The effect of peptide concentration on B was also investigated and shown to have a significant effect, but only at high concentrations (>80 mg/mL).
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http://dx.doi.org/10.1002/bip.20554 | DOI Listing |
J Phys Chem B
September 2025
Department of Chemical and Biological Engineering, Princeton University, Princeton, New Jersey 08544, United States.
Understanding and predicting the phase behavior of intrinsically disordered proteins (IDPs) is of significant interest due to their role in many biological processes. However, effectively characterizing phase behavior and its complex dependence on protein primary sequence remains challenging. In this study, we evaluate the efficacy of several simple computational metrics to quantify the propensity of single-component IDP solutions to phase separate; specific metrics considered include the single-chain radius of gyration, the second virial coefficient, and a newly proposed quantity termed the expenditure density.
View Article and Find Full Text PDFJACS Au
August 2025
Artie McFerrin Department of Chemical Engineering, Texas A&M University, College Station, Texas 77843, United States.
The morphology of biomolecular condensates plays a critical role in regulating intracellular organization and function by enabling both spatial and temporal control over biochemical processes. Recent studies have shown that small-molecule cosolutes can not only modulate phase separation but also influence condensate morphology. However, the mechanistic understanding of how small molecules regulate condensate structure remains limited.
View Article and Find Full Text PDFJ Phys Chem A
August 2025
Applied Chemicals and Materials Division, National Institute of Standards and Technology, Boulder, Colorado 80305, United States.
We report calculations of the second virial coefficient () of molecular hydrogen isotopologues in the rigid-rotor approximation using the path-integral Monte Carlo method. We present a novel method for efficient sampling of rotational degrees of freedom based on Doob's -transform that can be used with any spin isomer, including those for which the quantum mechanical propagator in imaginary time is negative, e.g.
View Article and Find Full Text PDFACS Omega
August 2025
Laboratory of Physics and Physical Chemistry of Foods, Department of Agrotechnology and Food Sciences, Wageningen University and Research, Bornse Weilanden 9, NL-6708 WG Wageningen, The Netherlands.
The calculation of spinodals for mixtures composed of many macromolecular components ( ≥ 2, not counting the solvent explicitly as a component) for a model including interactions up to quadratic terms in concentration is extended to the case of negative (second-order) virial coefficients, typically indicating attractive interactions between the components. Surprisingly, it is found that different permutations of the signs of the virial coefficients do not always lead to different spinodals. This observation is explained by means of an analysis of the effects of the signs of the virial coefficients in calculations in a parameter space introduced previously as "linear programming space", in which calculations for the spinodal can be done efficiently.
View Article and Find Full Text PDFMolecules
July 2025
Department of Engineering and Machinery in Food Industry, Faculty of Food Technology, University of Agriculture in Krakow, Balicka 122, 30-149 Krakow, Poland.
The aim of the research was to analyse the effect of different extraction temperatures on the colligative, hydrodynamic, and rheological properties of a water-soluble AXs fractions. The research material consisted of raw water extracts of arabinoxylans obtained from the husk at the following temperatures: 40 °C (AX40), 60 °C (AX60), 80 °C (AX80), and 100 °C (AX100). These were characterised in terms of their hydrodynamic, osmotic, and rheological properties, as well as the average molecular mass of the polysaccharide fractions.
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