Publications by authors named "Vivek Appadurai"

Polygenic scores (PGSs) for body mass index (BMI) may guide early prevention and targeted treatment of obesity. Using genetic data from up to 5.1 million people (4.

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  • Large biobank samples allow researchers to combine detailed family histories and genetic data to investigate complex diseases.
  • The study introduces a new method called Pearson-Aitken Family Genetic Risk Scores (PA-FGRS) to estimate disease risk based on family medical histories.
  • Applying PA-FGRS to major depressive disorder (MDD) shows improved understanding of genetic factors and clinical variability, and enhances the effectiveness of genetic studies across different complex conditions.
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  • - ADHD is a neurodevelopmental disorder often identified in childhood, with both genetic and environmental risk factors influencing its development, including maternal infections during pregnancy.
  • - A study measuring immune responses to various microorganisms in newborns found a significant association between higher antibody levels against cytomegalovirus (CMV) and mycoplasma with later ADHD diagnosis.
  • - There is a suggested dose-response relationship indicating that increased immune system activation before or at birth may elevate the risk of ADHD, highlighting the need for healthy pregnancy practices to minimize infection risks.
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  • The study analyzes 317 ancient genomes from Mesolithic and Neolithic periods across northern and western Eurasia to understand human migration impacts during the Holocene.* -
  • Findings show a significant genetic divide between eastern and western populations, with the west experiencing major gene replacement due to the introduction of farming, while the east maintained its hunter-gatherer ancestry longer.* -
  • The Yamnaya culture, which emerged around 5,000 BP, played a crucial role in spreading ancestry across western Eurasia, leading to significant genetic changes in European populations.*
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Background: Symptoms of major depressive disorder (MDD) are commonly assessed using self-rating instruments like the Patient Health Questionnaire-9 (PHQ-9) (current symptoms) and the Composite International Diagnostic Interview Short-Form (CIDI-SF) (worst-episode symptoms). We performed a systematic comparison between them for their genetic architecture and utility in investigating MDD heterogeneity.

Methods: Using data from the UK Biobank (n = 41,948-109,417), we assessed the single nucleotide polymorphism heritability and genetic correlation (r) of both sets of MDD symptoms.

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Attention deficit hyperactivity disorder (ADHD) is a complex disorder that manifests variability in long-term outcomes and clinical presentations. The genetic contributions to such heterogeneity are not well understood. Here we show several genetic links to clinical heterogeneity in ADHD in a case-only study of 14,084 diagnosed individuals.

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Biobanks often contain several phenotypes relevant to diseases such as major depressive disorder (MDD), with partly distinct genetic architectures. Researchers face complex tradeoffs between shallow (large sample size, low specificity/sensitivity) and deep (small sample size, high specificity/sensitivity) phenotypes, and the optimal choices are often unclear. Here we propose to integrate these phenotypes to combine the benefits of each.

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Symptoms of Major Depressive Disorder (MDD) are commonly assessed using self-rating instruments like the Patient Health Questionnaire 9 (PHQ9, for current symptoms), and the Composite International Diagnostic Interview Short-Form (CIDI-SF, for lifetime worst-episode symptoms). Using data from the UKBiobank, we show that corresponding symptoms endorsed through PHQ9 and CIDI-SF have low to moderate genetic correlations (rG=0.43-0.

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Sample recruitment for research consortia, biobanks, and personal genomics companies span years, necessitating genotyping in batches, using different technologies. As marker content on genotyping arrays varies, integrating such datasets is non-trivial and its impact on haplotype estimation (phasing) and whole genome imputation, necessary steps for complex trait analysis, remains under-evaluated. Using the iPSYCH dataset, comprising 130,438 individuals, genotyped in two stages, on different arrays, we evaluated phasing and imputation performance across multiple phasing methods and data integration protocols.

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  • Individuals with psychiatric disorders show different cognitive functions compared to the general population, often noticeable from an early age through varying school performances attributed to genetic factors.
  • A study involving nearly 31,000 people analyzed genetic influences on school performance in subjects like math and language, revealing a strong negative correlation between math abilities and risks for several psychiatric disorders.
  • In contrast, better language performance was positively associated with risks for disorders like schizophrenia, suggesting shared genetic links between language skills, creativity, and mental health issues.
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  • Researchers explored the link between genetic risk and stressful life events in depression using a genome-wide by environment interaction study (GWEIS) involving over 18,000 patients and 20,000 controls.
  • The study identified three novel genetic loci associated with depression, but these findings did not replicate in a larger sample from the UK Biobank.
  • The conclusion suggests that more extensive collaborative studies are needed for future research to gain better insight into the gene-stress interactions in depression.
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  • Common SNPs may account for 40-50% of human height variation, and this study identifies 12,111 SNPs linked to height from a large sample of 5.4 million individuals.
  • These SNPs cluster in 7,209 genomic segments, encompassing about 21% of the genome and showing varying densities enriched in relevant genes.
  • While these SNPs explain a substantial portion of height variance in European populations (40-45%), their predictive power is lower (10-24%) in other ancestries, suggesting a need for more research to enhance understanding in diverse populations.
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Febrile seizures represent the most common type of pathological brain activity in young children and are influenced by genetic, environmental and developmental factors. In a minority of cases, febrile seizures precede later development of epilepsy. We conducted a genome-wide association study of febrile seizures in 7635 cases and 83 966 controls identifying and replicating seven new loci, all with P < 5 × 10-10.

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Background: Language plays a major role in human behavior. For this reason, neurodevelopmental and psychiatric disorders in which linguistic ability is impaired could have a big impact on the individual's social interaction and general wellbeing. Such disorders tend to have a strong genetic component, but most past studies examined mostly the linguistic overlaps across these disorders; investigations into their genetic overlaps are limited.

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Although the genetic influence on voter turnout is substantial (typically 40-50%), the underlying mechanisms remain unclear. Across the social sciences, research suggests that 'resources for politics' (as indexed notably by educational attainment and intelligence test performance) constitute a central cluster of factors that predict electoral participation. Educational attainment and intelligence test performance are heritable.

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  • The study investigates the genetic links between autoimmune diseases and mental disorders, addressing the gap in previous genetic research on their co-occurrence.
  • Analysis of 64,039 Danish individuals revealed a significant bidirectional association, indicating that having one type of disorder increases the risk of developing the other.
  • Genetic studies identified 12 specific loci on chromosome 6 that are linked to autoimmune diseases, suggesting potential new candidate genes involved in these conditions.
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  • Autism spectrum disorder (ASD) and attention deficit hyperactivity disorder (ADHD) often occur together and have genetic components influencing their risk.
  • In a study of 39 families, researchers found that known genetic variants explained about 10% of the variance in comorbid ASD/ADHD, with lower contributions for ASD (4%) and ADHD (2%) individually.
  • The study indicates that individuals with adult ASD/ADHD needing ongoing specialist care carry a higher burden of rare genetic variants compared to unaffected family members, while affected relatives show intermediate levels.
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Background: Glucagon-like peptide-1 receptors (GLP-1Rs) are widely expressed in the brain. Evidence suggests that they may play a role in reward responses and neuroprotection. However, the association of GLP-1R with anhedonia and depression diagnosis has not been studied.

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  • Gastrointestinal infections can be severe and are linked to mental health issues, yet the genetic factors influencing this susceptibility are not well understood.
  • A study using data from 65,534 Danish individuals examined genetic variations that affect risk for gastrointestinal infections and found significant associations with various mental disorders, including ADHD and depression.
  • The research identified a specific genetic locus related to the ABO blood group, linking a risk allele to a higher likelihood of gastrointestinal infections, emphasizing the need for interdisciplinary approaches in genetics and medicine.
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(Gandal et al., "Shared molecular neuropathology across major psychiatric disorders parallels polygenic overlap" Science 09 Feb 2018:Vol. 359, Issue 6376, pp.

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