Publications by authors named "Hayato Ito"

More than 120 species of migrated butterflies have been recorded in the Ryukyu Islands, Japan. Biogeographically, it is important to investigate the origins and characteristics of these species as they might establish populations after accidental migration. In August 2016, a Papilio (Achillides) butterfly was collected on Sesoko Island, approximately 600 m from Okinawa Main Island.

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The repeat expansion in the human genome contributes to neurodegenerative disorders such as spinocerebellar ataxia (SCA) and amyotrophic lateral sclerosis. Transcripts with repeat expansions undergo noncanonical translation called repeat-associated non-AUG (RAN) translation. The NOP56 gene, implicated in SCA36, contains a GGCCTG repeat in its first intron.

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Cell lines derived from fish tissues are resistant to premature senescence under typical culture conditions. Previously, we demonstrated that fish genomes do not have a p16/Arf locus and that the absence of this locus underlies the lack of senescence in cultured fish cells. However, other factors may also contribute to this resistance.

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  • Researchers isolated a coronavirus called BANAL-20-236 (B236) from Malayan horseshoe bats and found it lacks a key site in its spike protein that is present in SARS-CoV-2.
  • * They compared B236's characteristics using human-derived cells and hamster infection experiments, discovering it's less pathogenic and grows slower in respiratory cells compared to SARS-CoV-2, but grows better in intestinal cells.
  • * The study suggests that SC2r-CoVs like B236 may primarily replicate in the intestines rather than the respiratory system, supporting prior findings about its behavior in other models.
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Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the largest single-stranded RNA virus known to date. Its genome contains multiple accessory protein genes that act against host immune responses but are not required for progeny virus production. The functions of the accessory proteins in the viral life cycle have been examined, but their involvement in viral pathogenicity remains unclear.

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Thermophilic HTA426 genome possesses a monoacylglycerol lipase (MAGL) gene. MAGLs can synthesize emulsifiers for use in the food and pharmaceutical industries from fatty acids and glycerol. They can also be used to analyze monoacylglycerol (MAG) levels in serum and food.

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Spinal subdural hematoma is uncommon but may become more prevalent with increasing anticoagulant use. Early diagnosis from symptoms like lower back pain and leg paralysis is crucial for timely intervention.

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Monitoring viral dynamics can improve our understanding of pathogenicity and tissue tropism. Because the gene size of RNA viruses is typically small, NanoLuc is the primary choice for accommodation within viral genome. However, NanoLuc/Furimazine and also the conventional firefly luciferase/D-luciferin are known to exhibit relatively low tissue permeability and thus less sensitivity for visualization of deep tissue including lungs.

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Introduction: Perioperative cerebrovascular accidents (CVAs) related to spine surgery, although rare, can lead to significant disabilities. More studies on spine surgeries are required to identify those at risk of perioperative CVAs. The characteristics and outcomes of patients that experienced CVAs during spine surgery were assessed through a retrospective descriptive study and meta-analysis.

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Many methods have been developed to measure the neutralizing capacity of antibodies to SARS-CoV-2. However, these methods are low throughput and can be difficult to quickly modify in response to emerging variants. Therefore, an experimental system for rapid and easy measurement of the neutralizing capacity of antibodies against various variants is needed.

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  • This study investigates the relationship between periostin, a protein linked to mechanical stress and inflammation, and the severity of intervertebral disc degeneration (IVDD) in patients.
  • Conducted on 198 patients who had lumbar spine issues, researchers used Pfirrmann grading to assess IVDD severity and measured serum periostin levels with ELISA kits.
  • The findings reveal a significant correlation between higher serum periostin levels and more severe IVDD, suggesting that periostin could be a valuable biomarker for diagnosing and monitoring IVDD.
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  • The emergence of a new Variant of Interest, XBB.1.5, is linked to mutations from the pre-existing variant XBB.1, specifically an S486P spike mutation and a nonsense mutation in ORF8.
  • Phylogenetic analysis indicates that XBB.1.5 maintains similar immune escape abilities compared to XBB.1, and structural studies reveal that the spike proteins of both variants are largely similar.
  • Research involving hamsters shows that the ORF8 nonsense mutation in XBB.1.5 reduces MHC suppression and results in lower virulence in this variant compared to XBB.1.
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Nucleotide repeat expansion of GGGGCC (GC) in the non-coding region of C9orf72 is the most common genetic cause underlying amyotrophic lateral sclerosis and frontotemporal dementia. Transcripts harboring this repeat expansion undergo the translation of dipeptide repeats via a non-canonical process known as repeat-associated non-AUG (RAN) translation. In order to ascertain the essential components required for RAN translation, we successfully recapitulated GC-RAN translation using an in vitro reconstituted translation system comprising human factors, namely the human PURE system.

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  • Most research on SARS-CoV-2 variants has concentrated on mutations in spike proteins that influence how the virus infects and spreads.
  • This study highlights that there are also significant mutations outside of the spike protein that can affect the virus's behavior.
  • Specifically, the study found that certain mutations in the Omicron BA.2 variant, including one in the spike protein and another further down the gene, play crucial roles in defining its characteristics.
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  • - The emergence of the Omicron subvariant BA.5 of SARS-CoV-2 requires urgent investigation due to its rapid spread and the need for ongoing control measures.
  • - BA.5 exhibits enhanced fusogenicity and a greater ability to disrupt respiratory barriers compared to earlier subvariants BA.1 and BA.2, even though its in vitro growth rates are similar.
  • - In a hamster model, BA.5 shows slightly higher pathogenicity than other Omicron variants but less than the ancestral strain, along with improved virus spread and immune response activation.
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  • - Abnormal expansions of the GGGGCC repeat sequence in noncoding regions are linked to familial amyotrophic lateral sclerosis and frontotemporal dementia, known as C9-ALS/FTD.
  • - Dipeptide repeat proteins (DPRs) from this expansion play a key role in disease progression, and the study investigates the regulatory effects of RNA-binding proteins (RBPs) on RAN translation related to these repeats.
  • - The research finds that the RBP FUS can suppress RAN translation and neurodegeneration by directly binding to the GGGGCC repeat RNA and influencing its G-quadruplex structure, offering potential therapeutic avenues for C9-ALS/FTD and similar diseases. *
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Winter geometrid moths show striking sexual dimorphism by having female-specific flightless morphs. The evolutionary grades of wing reduction in winter geometrid moths vary and range from having short wings, vestigial wings, to being wingless. Although the ontogenetic processes underlying the development of the wingless or short-wing morphs in Lepidoptera has been well studied, the mechanisms underlying the development of vestigial wing morphs in winter geometrid moths during metamorphosis are poorly understood.

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Introduction: We examined the neutralizing antibody production efficiency of the second and third severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) vaccine doses (2- and 3-dose) and neutralizing activity on mutant strains, including, the Ancestral, Beta and Omicron strains using green fluorescent protein-carrying recombinant SARS-CoV-2, in living-donor liver transplantation (LDLT) recipients.

Methods: The patients who were administered vaccines other than Pfizer- BioNTechBNT162b2 and who had coronavirus disease 2019 in this study period were excluded. We enrolled 154 LDLT recipients and 50 healthy controls.

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  • In late 2022, several Omicron subvariants emerged globally, characterized by specific amino acid changes in their spike proteins, indicating convergent evolution.
  • The study highlights a problematic lineage, BQ.1.1, which shows higher viral fitness due to five critical amino acid substitutions and better evasion of immune responses compared to the BA.5 subvariant.
  • In tests on hamsters, BQ.1.1 demonstrated lower pathogenicity than BA.5, revealing insights into the evolutionary patterns of Omicron subvariants up to 2022.
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To deal with the broad spectrum of coronaviruses, including severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), that threaten human health, it is essential to not only drugs develop that target viral proteins but also consider drugs that target host proteins/cellular processes to protect them from being hijacked for viral infection and replication. To this end, it has been reported that autophagy is deeply involved in coronavirus infection. In this study, we used airway organoids to screen a chemical library of autophagic modulators to identify compounds that could potentially be used to fight against infections by a broad range of coronaviruses.

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  • The SARS-CoV-2 Omicron BA.2.75 variant, emerging in May 2022, is a distinct descendant of BA.2 and shows a greater reproductive number than the dominant BA.5 variant.
  • BA.2.75 demonstrates different responses to vaccines and antibodies, retaining antiviral drug effectiveness but showing variable antibody sensitivity due to unique genetic changes.
  • This variant has enhanced ability to bind to human receptors, increased growth efficiency in lung cells, and heightened pathogenicity in hamsters, indicating a potentially greater risk to global health compared to BA.5.
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Smoking is one of the risk factors most closely related to the severity of coronavirus disease 2019 (COVID-19). However, the relationship between smoking history and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infectivity is unknown. In this study, we evaluated the ACE2 expression level in the lungs of current smokers, ex-smokers, and nonsmokers.

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  • The emergence of various subvariants of the SARS-CoV-2 Omicron BA.2, such as BA.2.9.1, BA.2.11, BA.2.12.1, BA.4, and BA.5, shows that they have higher effective reproduction numbers compared to the original BA.2 strain.
  • Neutralization experiments indicate that immunity from previous BA.1/2 infections is less effective against the newer BA.4/5 subvariants, which also replicate more efficiently and exhibit greater cell fusion than BA.2.
  • Research using hamsters and structural analysis of the BA.4/5 spike protein suggests that these subvariants are more pathogenic and pose a greater risk to global health
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  • * COVID vaccines currently in use are ineffective against BA.2, similar to BA.1, and there are significant differences in the virus's antigenicity between the two lineages.
  • * Laboratory studies indicate that BA.2 replicates more effectively in human nasal cells and is more pathogenic than BA.1, suggesting a greater global health risk.
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Purpose: This study evaluated the population pharmacokinetics of daptomycin in nonobese elderly patients with hypoalbuminemia and chronic kidney disease (CKD) using the glomerular filtration rate estimated from cystatin C (eGFRcys) and estimated its optimal dose.

Methods: We performed population pharmacokinetic analysis of the unbound concentrations of daptomycin. The probability of target attainment of 90% for achieving an area under the concentration-time curve of unbound daptomycin at steady state/ minimum inhibitory concentration ratio of ≥66.

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