Publications by authors named "Haoan Xu"

The human brain undergoes a complex and dynamic developmental process from birth through adolescence, driven by molecular and cellular mechanisms that shape its structure and function. Magnetic resonance imaging (MRI) has become an essential non-invasive tool for studying pediatric brain development and detecting neurological disorders. However, pediatric neuroimaging presents unique challenges, including motion artifacts, small anatomical structures, and immature tissue properties, necessitating specialized MRI techniques.

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Ex-vivo MRI offers invaluable insights into the complexity of the human brain, enabling high-resolution anatomical delineation and integration with histopathology, and thus, contributes to both basic and clinical studies on normal and pathological brains. However, ex-vivo MRI is challenging in sample preparation, acquisition, and data analysis, and existing ex-vivo MRI datasets are often single image modality and lack of ethnic diversity. In our study, we aimed to address these limitations by constructing a comprehensive multimodal MRI database acquired from six ex-vivo Chinese human brains.

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The laminar-specific distributions of Aβ and Tau deposition in the neocortex of Alzheimer's disease (AD) have been established. However, direct evidence about the effect of AD pathology on cortical microstructure is lacking in human studies. We performed high-resolution T2-weighted and diffusion-weighted MRI (dMRI) on 15 ex vivo whole-hemisphere specimens, including eight cases with low AD neuropathologic change, three cases with primary age-related tauopathy (PART), and four healthy controls (HCs).

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The ubiquitous presence of per- and polyfluoroalkyl substances (PFAS) in the environment has garnered global public concern. Epidemiological studies have proved that exposure to PFAS is associated with human health risks. Although evidence demonstrated the toxic mechanisms of PFAS based on animal models and traditional cell cultures, their limitations in inter-species differences and lack of human-relevant microenvironments hinder the understanding of health risks from PFAS exposure.

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In zebrafish, Müller glia (MG) cells retain the ability to proliferate and de-differentiate into retinal progenitor-like cells, subsequently differentiating into retinal neurons that can replace those damaged or lost due to retinal injury. In contrast, the reprogramming potential of MG in mammals has been lost, with these cells typically responding to retinal damage through gliosis. Considerable efforts have been dedicated to achieving the reprogramming of MG cells in mammals.

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Article Synopsis
  • The study aimed to evaluate how different MRI acquisition factors affect fetal brain measurements across multiple sites, focusing on structural measurements and developmental patterns.
  • A total of 340 MRI scans from 218 healthy fetuses were analyzed to identify the influence of field strength, manufacturer, resolution, and slice thickness on brain volume and morphology.
  • The results indicated that lower field strength and resolution led to measurement overestimations, but using the ComBat-GAM method effectively harmonized the data, allowing for accurate developmental assessment.
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Slice-to-volume registration and super-resolution reconstruction are commonly used to generate 3D volumes of the fetal brain from 2D stacks of slices acquired in multiple orientations. A critical initial step in this pipeline is to select one stack with the minimum motion among all input stacks as a reference for registration. An accurate and unbiased motion assessment (MA) is thus crucial for successful selection.

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Multi-slice magnetic resonance images of the fetal brain are usually contaminated by severe and arbitrary fetal and maternal motion. Hence, stable and robust motion correction is necessary to reconstruct high-resolution 3D fetal brain volume for clinical diagnosis and quantitative analysis. However, the conventional registration-based correction has a limited capture range and is insufficient for detecting relatively large motions.

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