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Early and accurate Alzheimer's disease (AD) diagnosis is critical for effective intervention, but it is still challenging due to neurodegeneration's slow and complex progression. Recent studies in brain imaging analysis have highlighted the crucial roles of deep learning techniques in computer-assisted interventions for diagnosing brain diseases. In this study, we propose AlzFormer, a novel deep learning framework based on a space-time attention mechanism, for multiclass classification of AD, MCI, and CN individuals using structural MRI scans. Unlike conventional deep learning models, we used spatiotemporal self-attention to model inter-slice continuity by treating T1-weighted MRI volumes as sequential inputs, where slices correspond to video frames. Our model was fine-tuned and evaluated using 1.5 T MRI scans from the ADNI dataset. To ensure the anatomical consistency of all the MRI data, All MRI volumes were pre-processed with skull stripping and spatial normalization to MNI space. AlzFormer achieved an overall accuracy of 94 % on the test set, with balanced class-wise F1-scores (AD: 0.94, MCI: 0.99, CN: 0.98) and a macro-average AUC of 0.98. We also utilized attention map analysis to identify clinically significant patterns, particularly emphasizing subcortical structures and medial temporal regions implicated in AD. These findings demonstrate the potential of transformer-based architectures for robust and interpretable classification of brain disorders using structural MRI.
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http://dx.doi.org/10.1016/j.neuroscience.2025.08.062 | DOI Listing |
Comput Biol Med
September 2025
Julius Wolff Institute, Berlin Institute of Health at Charité - Universitätsmedizin Berlin, Augustenburger Platz 1, 13353, Berlin, Germany. Electronic address:
Lameness in dairy cattle is a prevalent issue that significantly impacts both animal welfare and farm productivity. Traditional lameness detection methods often rely on subjective visual assessment, focusing on changes in locomotion and back curvature. However, these methods can lack consistency and accuracy, particularly for early-stage detection.
View Article and Find Full Text PDFJ Biomech
August 2025
Department of Orthopaedic Surgery, Duke University School of Medicine, Durham, NC, USA; Department of Biomedical Engineering, Pratt School of Engineering, Duke University, Durham, NC, USA; Department of Mechanical Engineering & Materials Science, Pratt School of Engineering, Duke University, Durham,
While knee osteoarthritis (OA) is a leading cause of disability in the United States, OA within the patellofemoral joint is understudied compared to the tibiofemoral joint. Mechanical alterations to cartilage may be among the first changes indicative of early OA. MR-based protocols have probed patellar cartilage mechanical function by measuring deformations in response to exercise.
View Article and Find Full Text PDFComput Biol Chem
August 2025
Department of Computer Science, GITAM (Deemed to be University), Visakhapatnam, Andhra Pradesh 530045, India. Electronic address:
-Aspect-Based Sentiment Analysis (ABSA) is considered a unique variant, which intends to identify the opinions regarding delicate topics. However, it is a neglected topic of study, ABSA attempts to find out the sentiment polarity on particular characteristics within statements, enabling more precise mining of consumers' emotional polarities regarding various aspects. The conversion of the conventional rating-aided recommendation approach into an effective aspect-aided procedure is made easier by this evaluation.
View Article and Find Full Text PDFBrief Bioinform
September 2025
College of Computing and Data Science, Nanyang Technological University, 639798, Singapore.
Protein phosphorylation regulates protein function and cellular signaling pathways, and is strongly associated with diseases, including neurodegenerative disorders and cancer. Phosphorylation plays a critical role in regulating protein activity and cellular signaling by modulating protein-protein interactions (PPIs). It alters binding affinities and interaction networks, thereby influencing biological processes and maintaining cellular homeostasis.
View Article and Find Full Text PDFBrief Bioinform
September 2025
Department of Computer Science, Hanyang University, 222 Wangsimni-ro, Seoul 04763, Republic of Korea.
Motivation: Mobile genetic elements (MGEs) play an important role in facilitating the acquisition of antibiotic resistance genes (ARGs) within microbial communities, significantly impacting the evolution of antibiotic resistance. Understanding the mechanism and trajectory of ARG acquisition requires a comprehensive analysis of the ARG-carrying mobilome-a collective set of MGEs carrying ARGs. However, identifying the mobilome within complex microbiomes poses considerable challenges.
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