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Structural variations (SVs) represent genomic variations that involve breakage and rejoining of DNA segments. SVs can alter normal gene dosage, lead to rearrangements of genes and regulatory elements within a topologically associated domain, and potentially contribute to physical traits, genomic disorders, or complex traits. Recent advances in sequencing technologies and bioinformatics have greatly improved SV detection and interpretation at unprecedented resolution and scale. Despite these advances, the functional impact of SVs, the underlying SV mechanism(s) contributing to complex traits, and the technical challenges associated with SV detection and annotation remain active areas of research. This review aims to provide an overview of structural variations, their mutagenesis mechanisms, and their detection in the genomics era, focusing on the biological significance, methodologies, and future directions in the field.
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http://dx.doi.org/10.3390/genes16080905 | DOI Listing |
J Exp Bot
September 2025
PHIM Plant Health Institute, Univ Montpellier, INRAE, CIRAD, Institut Agro, IRD, Montpellier, France.
Varietal mixtures are a promising agro-ecological approach to stabilizing yields by reducing diseases. The effects of mixtures stem from modifications of epidemiological processes and underestimated plant-plant interactions, which could explain some of the paradoxical observations made in the field. However, the role of plant-plant interactions in modifying bread wheat and durum wheat susceptibility to Septoria tritici blotch remains to be elucidated.
View Article and Find Full Text PDFPLoS One
September 2025
Department of Engineering and School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom.
Citizen science engages volunteers to contribute data to scientific projects, often through visual annotation tasks. Hearing based activities are rare and less well understood. Having high quality annotations of performed music structures is essential for reliable algorithmic analysis of recorded music with applications ranging from music information retrieval to music therapy.
View Article and Find Full Text PDFPLoS One
September 2025
Department of Life and Environmental Sciences, Polytechnic University of Marche, Ancona, Italy.
Microfibers are pollutants of increasing concern, as they accumulate in aquatic environments and pose risks to living organisms. Once released, they undergo degradation processes that reduce their size and enhance their ability to interact with biological systems. Among these processes, photodegradation is a key driver, leading to fiber fragmentation and structural shrinkage.
View Article and Find Full Text PDFGenetica
September 2025
Faculty of Fisheries and Aquaculture Sciences, Universiti Malaysia Terengganu, Kuala Nerus, Terengganu, Malaysia.
Population genetics plays a critical role in creating policies for managing fisheries, conservation, and development of aquaculture. The golden snapper, Lutjanus johnii (Bloch, 1792), is a highly commercial and aquaculture important snapper species. This study used mitochondrial markers D-loop (151 specimens) and Cytochrome b (Cyt-b, 120 specimens) from 10 populations, including populations from the east South China Sea, the west South China Sea and the Strait of Malacca to investigate the genetic diversity, population connectivity, and historical demography of L.
View Article and Find Full Text PDFBrain Struct Funct
September 2025
Department of Neurosurgery, Yeditepe University School of Medicine, Istanbul, Turkey.
The anterior commissure (AC) has an anterior and posterior limb. Despite comprehensive information about the posterior limb, there is limited and conflicting information about the anterior limb in the literature. We aimed to show the anatomical relationships of the AC with neighboring structures by using white matter microdissection and magnetic resonance (MR) tractography, primarily on the anterior limb of the AC.
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