Forensic application research of kinship identification disclosed by genetic polymorphisms of 150 loci in three panels.

Gene

Guangzhou Key Laboratory of Forensic Multi-Omics for Precision Identification, School of Forensic Medicine, Southern Medical University, Guangzhou, Guangdong 510515, China; Microbiome Medicine Center, Department of Laboratory Medicine, Zhujiang Hospital, Southern Medical University, Guangzhou, Guang

Published: September 2025


Category Ranking

98%

Total Visits

921

Avg Visit Duration

2 minutes

Citations

20

Article Abstract

Insertion/deletion (InDel) polymorphisms show promising applications in the field of forensic genetics, such as ancestry inference and complex kinship identification. In the present study, we investigated the genetic polymorphisms and forensic parameters of Chinese Baoan group based on three panels, and explored the genetic connections between the Baoan group and 26 intercontinental reference populations. Based on simulated genotyping data constructed from allele frequencies of 150 loci, the study utilized the likelihood ratio (LR) method and identical by state (IBS) method to assess the system efficacy of different panels and identification of complex kinships with the increase in the number of genetic markers. The results indicated that the 150 loci were highly polymorphic in the Baoan group, and the Baoan group was genetically closer to the reference East Asian populations. The identification efficacy of different kinships based on the 150 loci was greater than that of single panel alone or a combination of any two panels, which suggested that both the increase in the number of genetic markers and the joint analysis of different panels could enhance the system efficacy of kinship identification. The system efficacy for the identifications of different kinships based on the combination of 150 loci were 1 and 0.9900 in parent-child and full-sibling pairs, respectively (LR > 10,000, LR < 0.0001); 0.8595, 0.8790, and 0.8615 in half-sibling, grandparent-grandchild, and uncle-nephew pairs, respectively (LR > 10, LR < 0.1); 0.3170 in first cousin pairs (LR > 10, LR < 0.1).

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.gene.2025.149666DOI Listing

Publication Analysis

Top Keywords

150 loci
20
baoan group
16
kinship identification
12
system efficacy
12
genetic polymorphisms
8
three panels
8
increase number
8
number genetic
8
genetic markers
8
kinships based
8

Similar Publications

One of the most powerful tools for identifying genomic regions associated with various phenotypes is GWAS. Identifying genes influencing milk production traits in Iranian Holstein dairy cows is crucial to understanding the genetic mechanisms underlying these traits and improving future milk production. Therefore, using a single-step GWAS, this study aimed to identify genomic regions, genes, and pathways associated with milk yield (MY), milk fat percentage (FP), milk protein percentage (PP), and somatic cell count (SCC) traits in the Iranian Holstein cattle population.

View Article and Find Full Text PDF

Males and females exhibit differences in proteome profiles associated with disease risk. However, sex-dimorphic protein quantitative trait loci (SD-pQTL) and their effects on sex differences in health disorders have not been thoroughly investigated. We conducted a sex-stratified, genome-wide association study on 2,922 proteins using data from 30,272 individuals of Caucasian ancestry from the UK Biobank and compared the estimated effects on protein levels of these variants in the men and women to identify SD-pQTLs.

View Article and Find Full Text PDF

Estimated timeline for the evolution of symbiotic nitrogen fixing Paraburkholderia.

Mol Phylogenet Evol

August 2025

Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa. Electronic address:

The nitrogen-fixing and nodule-forming symbionts of legumes, which belong to the class Betaproteobacteria, are informally known as beta-rhizobia. Thus far, members of this group have only been found in the genera Paraburkholderia, Trinickia and Cupriavidus. In this study, we investigate the poorly characterized evolutionary history of this trait in the predominant beta-rhizobial genus, Paraburkholderia.

View Article and Find Full Text PDF

Multiple Sclerosis (MS) is an immune-mediated demyelinating disease of the central nervous system (CNS) with a complex etiology involving environmental and genetic factors. Numerous genetic risk loci for MS have been nominated through genome-wide association studies, with most associated variants residing in non-coding regions. However, further work is needed to understand how genetic variation contributes to disease-related alterations to gene expression.

View Article and Find Full Text PDF

Genetic basis for broad interspecific compatibility in Solanum verrucosum.

Plant J

August 2025

Department of Plant Soil and Microbial Sciences, Molecular Plant Science, Michigan State University, 1066 Bogue Street Room 2210, East Lansing, Michigan, 48824, USA.

Solanum verrucosum Schlechtendal (2x = 2n = 24) is unique among the clade 4 Solanum Sect Petota species. In addition to being one of the only fully self-compatible diploid potato species, S. verrucosum is the only clade 4 species that lacks prezygotic interspecific reproductive barriers.

View Article and Find Full Text PDF