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We present a foundation model for exascale molecular dynamics simulations by leveraging an E(3) equivariant network architecture (Allegro) and a set of large-scale organic and inorganic materials data sets merged by the Total Energy Alignment framework. The obtained model (Allegro-FM) is versatile for various material simulations for diverse downstream tasks covering 89 elements in the training sets. Allegro-FM exhibits excellent agreement with high-level quantum chemistry theories in describing structural, mechanical, and thermodynamic properties, while exhibiting emergent capabilities for structural correlations, reaction kinetics, mechanical strengths, fracture, and solid/liquid dissolution, for which the model has not been trained. Furthermore, we demonstrate the robust predictability and generalizability of Allegro-FM for chemical reactions using Transition1x, which consists of tens of thousands of organic reactions and 9.6 million configurations including transition state data, in addition to reactive simulations using calcium silicate hydrates as a test bed. With its computationally efficient, strictly local network architecture, Allegro-FM scales up to multibillion-atom systems with a parallel efficiency of 0.975 on the exaflop/s Aurora supercomputer at Argonne Leadership Computing Facility. The approach presented in this work demonstrates the potential of the foundation model for novel materials design and discovery based on large-scale atomistic simulations.
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http://dx.doi.org/10.1021/acs.jpclett.5c00605 | DOI Listing |
Environ Sci Process Impacts
September 2025
Aix Marseille Univ., CNRS, LCE, Marseille, France.
Surfactant-rich aqueous media are common in natural environments. The sea surface microlayer and sea spray droplets are good examples and are also frequently markedly enriched in organic pollutants. This study focuses on the degradation kinetics of organic pollutants initiated by the hydroxyl radical in such surfactant-rich environments.
View Article and Find Full Text PDFArthritis Rheumatol
September 2025
Washington DC Veterans Affairs Medical Center; Georgetown University, Washington, DC, USA.
Objective: To evaluate the clinical characteristics, social deprivation, insurance coverage, and medication use across regional subsets of patients with psoriatic arthritis (PsA) in the US.
Methods: A cross-sectional study of PsA patients in the Rheumatology Informatics System for Effectiveness (RISE) registry between January 2020 and March2023 was conducted. Distribution of high disease activity (HDA - RAPID3>12), high comorbidity (RxRisk ≥90 percentile), high Area Deprivation Index (ADI ≥80), insurance coverage, prednisone ≥10mg daily, and all DMARD therapies across geographic regions were evaluated.
Histol Histopathol
September 2025
Center for Experimental Teaching, School of Pharmacy, Guangzhou Medical University, Guangzhou, China.
Background: The aim of this study was to establish a rat model of premature ovarian failure (POF) with cyclophosphamide (CTX), and explore the molecular basis of POF and the mechanism of Guishen-Erxian Decoction (GSEXD) to improve POF from the perspective of oxidative stress regulation of ovarian granulosa cell (OGC) DNA fragmentation.
Method: The study utilized SD rats to establish a POF model via CTX. Rats were divided into Control, POF group, three GSEXD dosage groups (low, medium, high), and a GSEXD+PI3K agonist group to assess GSEXD's therapeutic effects on oxidative stress, DNA fragmentation and ovarian damage.
Nano Lett
September 2025
Depto. Polimeros y Materiales Avanzados: Fisica, Quimica y Tecnologia, Universidad del País Vasco, UPV/EHU, 20018 San Sebastian, Spain.
We demonstrate a novel approach to controlling and stabilizing magnetic skyrmions in ultrathin multilayer nanostructures through spatially engineered magnetostatic fields generated by ferromagnetic nanorings. Using analytical modeling and micromagnetic simulations, we show that the stray fields from a Co/Pd ferromagnetic ring with out-of-plane magnetic anisotropy significantly enhance the Néel-type skyrmion stability in an Ir/Co/Pt nanodot, even stabilizing the skyrmion in the absence of Dzyaloshinskii-Moriya interactions. We demonstrate precise control over the skyrmion size and stability.
View Article and Find Full Text PDFNanoscale
September 2025
Institute of Health Innovation & Technology, National University of Singapore, Singapore, 117599, Singapore.
The rapid increase in multidrug-resistant (MDR) bacteria and biofilm-associated infections has intensified the global need for innovative antimicrobial strategies. Phage therapy offers promising precision against MDR pathogens by utilizing the natural ability of phages to specifically infect and lyse bacteria. However, their clinical application is hampered by challenges such as narrow host range, immune clearance and limited efficacy within biofilms.
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