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Article Abstract

NUP98 fusion oncoproteins (FOs) are a hallmark of childhood acute myeloid leukemia (AML). NUP98 FOs drive leukemogenesis through phase-separated condensate formation and maintenance of an active chromatin landscape at stem cell-associated genes in cooperation with epigenetic regulators. Here we show that MYST family histone acetyltransferase (HAT) complex proteins including KAT6A/MOZ, KAT7/HBO1, and the common KAT6A/7 complex subunit BRPF1 associate with NUP98 FOs on chromatin and within condensates. MYST HATs are molecular dependencies in NUP98-rearranged (NUP98-r) leukemia, and genetic inactivation or pharmacologic inhibition of Kat6a and Kat7 impairs NUP98-r cell fitness. KAT6A/7 inhibition decreased global H3K23ac levels, displaced NUP98::HOXA9 from chromatin at the Meis1 locus, and led to myeloid cell differentiation. Additionally, KAT6A/7 inhibition decreased leukemic burden in multiple NUP98-r leukemia xenograft mouse models, synergized with Menin inhibitor treatment, and was efficacious in Menin inhibitor-resistant cells. In summary, we show that MYST family HATs are therapeutically actionable dependencies in NUP98-r AML.

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http://dx.doi.org/10.1158/2159-8290.CD-24-1772DOI Listing

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NUP98 fusion oncoproteins (FOs) are a hallmark of childhood acute myeloid leukemia (AML). NUP98 FOs drive leukemogenesis through phase-separated condensate formation and maintenance of an active chromatin landscape at stem cell-associated genes in cooperation with epigenetic regulators. Here we show that MYST family histone acetyltransferase (HAT) complex proteins including KAT6A/MOZ, KAT7/HBO1, and the common KAT6A/7 complex subunit BRPF1 associate with NUP98 FOs on chromatin and within condensates.

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Targeting the MYST acetyltransferases are an exciting therapeutic opportunity in acute myeloid leukaemia (AML). Here we define the individual and combined contribution of KAT6A, KAT6B and KAT7, in range of AML models showing that although KAT6A/B inhibition is efficacious in some pre-clinical models, simultaneous targeting of KAT7, with the novel inhibitor PF-9363, markedly increases efficacy. KAT7 interacts with Menin and the MLL complex and is co-localised at chromatin to co-regulate oncogenic transcriptional programs.

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Longevity and Aging Institute, The Shanghai Key Laboratory of Medical Epigenetics, Institutes of Biomedical Sciences, Department of Pancreatic Surgery, Zhongshan Hospital, Fudan University, Shanghai 200030, China. Electronic address:

SPT6 (suppressor of Ty 6) is a conserved histone chaperone that plays critical roles in RNA Pol II progression and nucleosome reassembly. However, the functions of SPT6 in chromatin regulation remain incompletely understood. Here, we show that SPT6 localizes to histone H3 lysine 14 acetylation (H3K14Ac)-enriched regions in mouse embryonic stem cells (mESCs).

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Article Synopsis
  • ING4 and ING5 are proteins that help regulate gene expression and are part of histone acetyltransferase complexes involved in heart development.
  • Mutations in genes like KAT6A and KAT6B are linked to heart defects, and studies on mice with disrupted ING4 and ING5 reveal serious developmental issues, including heart defects.
  • The absence of these proteins leads to problems with cell development, structure, and gene expression during early embryonic stages, suggesting mutations in ING5 may contribute to human heart conditions like ventricular septal defects.*
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