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Background: Muscle strength is one of the key components in the diagnosis of sarcopenia. The aim of this study was to train a machine learning model to predict reference values and percentiles for handgrip strength and chair-stand test (CST), in a large cohort of community dwellers recruited in the Longevity check-up (Lookup) 8+ project.
Methods: The longevity checkup project is an ongoing initiative conducted in unconventional settings in Italy from 1 June 2015. Eligible participants were 18+ years and provided written informed consent. After a 70/20/10 split in training, validation and test set, a quantile regression forest (QRF) was trained. Performance metrics were R-squared (R), mean squared error (MSE), root mean squared error (RMSE) and mean Winkler interval score (MWIS) with 90% prediction coverage (PC). Metrics 95% confidence intervals (CI) were calculated using a bootstrap approach. Variable contribution was analysed using SHapley Additive exPlanations (SHAP) values. Probable sarcopenia (PS) was defined according to the European Working Group on Sarcopenia in Older People 2 (EWGSOP2) criteria.
Results: Between 1 June 2015 and 23 November 2024, a total of 21 171 individuals were enrolled, of which 19 995 were included in our analyses. In the overall population, 11 019 (55.1%) were females. Median age was 56 years (IQR 47.0-67.0). Five variables were included: age, sex, height, weight and BMI. After the train/validation/test split, 13 996 subjects were included in the train set, 4199 in validation set and 1800 in the test set. For handgrip strength, the R was 0.65 (95% CI 0.63-0.67) in the validation set and 0.64 (95% CI 0.62-0.67) in the test set. PCs were 91.5% and 91.2%, respectively. For CST test, the R was 0.23 (95% CI 0.20-0.25) in the validation set and 0.24 (95% CI 0.20-0.28) in the test set. The PCs were 89.5% and 89.3%. Gender was the most influential variable for handgrip and age for CST. In the validation set, 23% of subjects in the first quartile for handgrip and 13% of subjects in the fourth quartile for CST test met criteria of PS.
Conclusions: We developed and validated a QRF model to predict subject-specific quantiles for handgrip and CST. These models hold promise for integration into clinical practice, facilitating cost-effective and time-efficient early identification of individuals at elevated risk of sarcopenia. The predictive outputs of these models may serve as surrogate biomarkers of the aging process, capturing functional decline.
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http://dx.doi.org/10.1002/jcsm.13868 | DOI Listing |
Neurotrauma Rep
August 2025
Institute of Acupuncture and Moxibustion, China Academy of Chinese Medical Sciences, Beijing, China.
Accurate differentiation between persistent vegetative state (PVS) and minimally conscious state and estimation of recovery likelihood in patients in PVS are crucial. This study analyzed electroencephalography (EEG) metrics to investigate their relationship with consciousness improvements in patients in PVS and developed a machine learning prediction model. We retrospectively evaluated 19 patients in PVS, categorizing them into two groups: those with improved consciousness ( = 7) and those without improvement ( = 12).
View Article and Find Full Text PDFRadiol Adv
September 2024
Department of Radiology, Northwestern University and Northwestern Medicine, Chicago, IL, 60611, United States.
Background: In clinical practice, digital subtraction angiography (DSA) often suffers from misregistration artifact resulting from voluntary, respiratory, and cardiac motion during acquisition. Most prior efforts to register the background DSA mask to subsequent postcontrast images rely on key point registration using iterative optimization, which has limited real-time application.
Purpose: Leveraging state-of-the-art, unsupervised deep learning, we aim to develop a fast, deformable registration model to substantially reduce DSA misregistration in craniocervical angiography without compromising spatial resolution or introducing new artifacts.
J Hepatocell Carcinoma
September 2025
Department of Liver Disease, Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai, 201203, People's Republic of China.
Objective: Anoikis is an anchorage-dependent programmed cell death implicated in multiple pathological processes of cancers; however, the prognostic value of anoikis-related genes (ANRGs) in hepatocellular carcinoma (HCC) remains unclear. Our study aims to develop an ANRGs-based prediction model to improve prognostic assessment in HCC patients.
Methods: The RNA-seq profile was performed to estimate the expression of ANRGs in HCC patients.
J Appl Stat
February 2025
Department of Mathematics and Statistics, Wright State University, Dayton, Ohio, USA.
Overdispersion is a common phenomenon in genetic data, such as gene expression count data. In genetic association studies, it is important to investigate the association between a gene expression and a set of genetic variants from a pathway. However, existing approaches for pathway analysis are primarily designed for continuous and binary outcomes and are not applicable to overdispersed count data.
View Article and Find Full Text PDFJ Immunother Precis Oncol
August 2025
The Christie NHS Foundation Trust, Manchester Academic Health Sciences Centre, Manchester, United Kingdom.
Introduction: Patients with advanced solid tumors may be considered for early phase clinical trials investigating the safety, tolerability, and dosing of experimental therapies. Optimizing participant selection is critical to maximize clinical benefit and meet trial endpoints with fewer participants. One in six participants does not meet routine life expectancy requirements (>3 months), highlighting the need for improved prognostication.
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